Gene Sare_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3476 
Symbol 
ID5703539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand- 
Start bp4009061 
End bp4009747 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content72% 
IMG OID641272903 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001538269 
Protein GI159039016 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.393923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0265794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACAC AGCTGAACTG GGACCAGTAC GCCACGGCGT GGGCACGTCT GCATGGTGGG 
TTCGATCCGC GTGCCGCCGC CCCACCCGTC CGCGCCTGGC TACGCCTCGC CTACCACGTG 
GGCTATGTGC TGGGTCGGCT ACGGGTCACC CCGACCACGG TGACCGTTGT CGGGGTGTTG 
CTCTGCTTCG GAGTGCCACT GGTCGCGACA CGCCCGCAGG ACGGCCCCTT CCTCGGCGCA 
CTGCTCGTGC TGCTCGCCTC GGTGGCGGAC AGCGTTGACG GGGCTGTGGC GGTGGTGAGC 
AACCGCACCA CGCGGCTCGG GTACGTCTAC GACTCGGTGG CTGACCGGCT CGGTGAGGTG 
GCCTGGCTGG TCGCGTTCTG GCTGCTCGGC GCGCCGGGTG CGCTGGTGGC CGCCGGCGGC 
GGGCTCTCCT GGCTGCACGA GTACGTCCGC GCGCGGGCGA CGTCCGCCGG GATGCGGGAG 
ATCGGCGCGG TGACCGTAGG CGAGCGGCCG ACCCGGGTCG CGGTGGCAAT CGTCGGCCTG 
TTGCTGGCCG GGCTGGCCGG GTTGGTCGAG CCGGACCTGG CCGCAGGCAC CATCACCATG 
GCGACCGCGG TCTGGGTGCT GCTGGCCGGC TTCGGTCTCG GGCAGCTGCT GGCCGCTGTC 
CGAGGCGCAC TGATCGACGT CGACTGA
 
Protein sequence
MGTQLNWDQY ATAWARLHGG FDPRAAAPPV RAWLRLAYHV GYVLGRLRVT PTTVTVVGVL 
LCFGVPLVAT RPQDGPFLGA LLVLLASVAD SVDGAVAVVS NRTTRLGYVY DSVADRLGEV 
AWLVAFWLLG APGALVAAGG GLSWLHEYVR ARATSAGMRE IGAVTVGERP TRVAVAIVGL 
LLAGLAGLVE PDLAAGTITM ATAVWVLLAG FGLGQLLAAV RGALIDVD