Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3473 |
Symbol | |
ID | 5708075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4005432 |
End bp | 4006274 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272900 |
Product | hypothetical protein |
Protein accession | YP_001538266 |
Protein GI | 159039013 |
COG category | [S] Function unknown |
COG ID | [COG2324] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0783282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0771656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC CCACCGCGCA CACCCCCCGG ACCACCTGGG CGCTGTTGGC CGTGCTGATG CTGGTGCAGA TCTGCTACCC CCTGACCGCC GGGCAGACCC GGGCCCGGCT CACCGTCGCC ACGGTCCTGC TCGGCTACCT GCTCTCGACC GGCCACGCGC TGCTCACCCG CGGTCCCCGG GCAGCGGCGG CGTTGATCGT CACGGCCACC GGCGGCGGCT TCGCCATCGA GGCGCTCGGG GTGGCCACCG GGTTCCCGTT CGGCAGCTAC GACTACTCGG AGCAGCTCGG GCCGAAGCTG GCTGGCGTAC CGCTGATCAT CCCACTCGCC TGGACCTGGA TGGCCTGGCC CGCCTGGCTG GCCGCGGTTC GCCTCATCCG CGGCGGGTCG GCCGGAGGCG CCGGGCGGGC TATCCAGCGA ATCGCGCTGG CGGCGATCGG GCTGGCCGCC TGGGACCTCT TCCTCGACCC GCAGATGGTC GCCGAGGGGC ACTGGGCCTG GCGGGACACC ACCCCCGCGT TGCCCGGCCT GCCCGGCATT CCGATCAGCA ACTACCTGGG CTGGCTGCTC TTCGCGGTAC TGGTGATGAT CGCCCTGCGT CCACTGGCCG GCACCGCCGT GACCACCACC GACAGTCGCG ACGCTCCGAT GCTCGCGCTC TACCTGTGGA CATACTTCTC CAGCGTGCTG GCCCACGCCG TCTTCCTCGA CCTGCCCGCC TCAGCCGGAT GGGGCTCGGC GGTCATGGGG CTGACCGCCG TGCCGCTGGC AGTGACACTG CTACCCGGAC GCCGCCGGTC GGCACCGGAG AGCCGGCGTC CCCGCGCCGG TACGTCGGCA TGA
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Protein sequence | MIRPTAHTPR TTWALLAVLM LVQICYPLTA GQTRARLTVA TVLLGYLLST GHALLTRGPR AAAALIVTAT GGGFAIEALG VATGFPFGSY DYSEQLGPKL AGVPLIIPLA WTWMAWPAWL AAVRLIRGGS AGGAGRAIQR IALAAIGLAA WDLFLDPQMV AEGHWAWRDT TPALPGLPGI PISNYLGWLL FAVLVMIALR PLAGTAVTTT DSRDAPMLAL YLWTYFSSVL AHAVFLDLPA SAGWGSAVMG LTAVPLAVTL LPGRRRSAPE SRRPRAGTSA
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