Gene Sare_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3473 
Symbol 
ID5708075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4005432 
End bp4006274 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content73% 
IMG OID641272900 
Producthypothetical protein 
Protein accessionYP_001538266 
Protein GI159039013 
COG category[S] Function unknown 
COG ID[COG2324] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0783282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0771656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC CCACCGCGCA CACCCCCCGG ACCACCTGGG CGCTGTTGGC CGTGCTGATG 
CTGGTGCAGA TCTGCTACCC CCTGACCGCC GGGCAGACCC GGGCCCGGCT CACCGTCGCC
ACGGTCCTGC TCGGCTACCT GCTCTCGACC GGCCACGCGC TGCTCACCCG CGGTCCCCGG
GCAGCGGCGG CGTTGATCGT CACGGCCACC GGCGGCGGCT TCGCCATCGA GGCGCTCGGG
GTGGCCACCG GGTTCCCGTT CGGCAGCTAC GACTACTCGG AGCAGCTCGG GCCGAAGCTG
GCTGGCGTAC CGCTGATCAT CCCACTCGCC TGGACCTGGA TGGCCTGGCC CGCCTGGCTG
GCCGCGGTTC GCCTCATCCG CGGCGGGTCG GCCGGAGGCG CCGGGCGGGC TATCCAGCGA
ATCGCGCTGG CGGCGATCGG GCTGGCCGCC TGGGACCTCT TCCTCGACCC GCAGATGGTC
GCCGAGGGGC ACTGGGCCTG GCGGGACACC ACCCCCGCGT TGCCCGGCCT GCCCGGCATT
CCGATCAGCA ACTACCTGGG CTGGCTGCTC TTCGCGGTAC TGGTGATGAT CGCCCTGCGT
CCACTGGCCG GCACCGCCGT GACCACCACC GACAGTCGCG ACGCTCCGAT GCTCGCGCTC
TACCTGTGGA CATACTTCTC CAGCGTGCTG GCCCACGCCG TCTTCCTCGA CCTGCCCGCC
TCAGCCGGAT GGGGCTCGGC GGTCATGGGG CTGACCGCCG TGCCGCTGGC AGTGACACTG
CTACCCGGAC GCCGCCGGTC GGCACCGGAG AGCCGGCGTC CCCGCGCCGG TACGTCGGCA
TGA
 
Protein sequence
MIRPTAHTPR TTWALLAVLM LVQICYPLTA GQTRARLTVA TVLLGYLLST GHALLTRGPR 
AAAALIVTAT GGGFAIEALG VATGFPFGSY DYSEQLGPKL AGVPLIIPLA WTWMAWPAWL
AAVRLIRGGS AGGAGRAIQR IALAAIGLAA WDLFLDPQMV AEGHWAWRDT TPALPGLPGI
PISNYLGWLL FAVLVMIALR PLAGTAVTTT DSRDAPMLAL YLWTYFSSVL AHAVFLDLPA
SAGWGSAVMG LTAVPLAVTL LPGRRRSAPE SRRPRAGTSA