Gene Sare_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3450 
Symbol 
ID5708199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3977838 
End bp3978593 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content74% 
IMG OID641272877 
ProductSNARE associated Golgi protein 
Protein accessionYP_001538243 
Protein GI159038990 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00650672 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCACG ACGGCCGCCG CAGGACCATC CCCCGTGGCG GCCACCACCA CGGCTCGCAC 
CACCGCGCCC GCCGTCACCG GATGGGGATC CGGCTCCGCT GGCGGCTGAC GCGCGACCCG
GCAACCGGCC GGTTCGGCCT GCTCCTGCTC CTGCTCGCCG GATTCGGGGT GGCGCTGCTC
GTGGTTCCCC GACCGGACCC GGCCGACCTG CCCGGATTGG CCGACCGGTT GGGCGGTTAC
GCCCCGGTCA CCGCGGTCAT CGGCGGAGCG CTCCTGCTCG TCGCGCTGGT CCCGCGCACC
TTCATCACCC TGGCCTCCGG CGCCCTCTTC GGTGCCCTGG AAGGGGCCGC GTACGCGCTC
GGCGCGGCAC TGCTGGCCGC AGCCATCGGC TTCATGGTCG GCCGGGTACT CGGGCGGGAG
TTCGTCGCCG AACGGATTCG CGGTCGCCTC GCCCGGCTGG ACGGCTGGTT CACCCGGCAG
AACGTGCTCG GAGTGGTCAC CGTGCGGCTG CTGCCGATCG CCGGCTTCGG CCTGGTCAGC
TACGGCTACG GCACCACCGG CGCACGGGTG TTGCCGTTCC TCGTCGGCAG TGTCGTCGCC
TCGGCGCCGA CCGCCTTCGG ATACGCCGCC GTCGGTGCCG CGGTCACCTC GCCGGGCCAG
GTCAACTGGT TCGCCGCCGC CCCGGCCGGG CTCGGCCTGA TCGCCAGCGC GGTGCTCATC
CACCGCTGGT GGCGGACCGA GCGCAACCTC CCCTGA
 
Protein sequence
MTHDGRRRTI PRGGHHHGSH HRARRHRMGI RLRWRLTRDP ATGRFGLLLL LLAGFGVALL 
VVPRPDPADL PGLADRLGGY APVTAVIGGA LLLVALVPRT FITLASGALF GALEGAAYAL
GAALLAAAIG FMVGRVLGRE FVAERIRGRL ARLDGWFTRQ NVLGVVTVRL LPIAGFGLVS
YGYGTTGARV LPFLVGSVVA SAPTAFGYAA VGAAVTSPGQ VNWFAAAPAG LGLIASAVLI
HRWWRTERNL P