Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3450 |
Symbol | |
ID | 5708199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3977838 |
End bp | 3978593 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641272877 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001538243 |
Protein GI | 159038990 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00650672 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCACG ACGGCCGCCG CAGGACCATC CCCCGTGGCG GCCACCACCA CGGCTCGCAC CACCGCGCCC GCCGTCACCG GATGGGGATC CGGCTCCGCT GGCGGCTGAC GCGCGACCCG GCAACCGGCC GGTTCGGCCT GCTCCTGCTC CTGCTCGCCG GATTCGGGGT GGCGCTGCTC GTGGTTCCCC GACCGGACCC GGCCGACCTG CCCGGATTGG CCGACCGGTT GGGCGGTTAC GCCCCGGTCA CCGCGGTCAT CGGCGGAGCG CTCCTGCTCG TCGCGCTGGT CCCGCGCACC TTCATCACCC TGGCCTCCGG CGCCCTCTTC GGTGCCCTGG AAGGGGCCGC GTACGCGCTC GGCGCGGCAC TGCTGGCCGC AGCCATCGGC TTCATGGTCG GCCGGGTACT CGGGCGGGAG TTCGTCGCCG AACGGATTCG CGGTCGCCTC GCCCGGCTGG ACGGCTGGTT CACCCGGCAG AACGTGCTCG GAGTGGTCAC CGTGCGGCTG CTGCCGATCG CCGGCTTCGG CCTGGTCAGC TACGGCTACG GCACCACCGG CGCACGGGTG TTGCCGTTCC TCGTCGGCAG TGTCGTCGCC TCGGCGCCGA CCGCCTTCGG ATACGCCGCC GTCGGTGCCG CGGTCACCTC GCCGGGCCAG GTCAACTGGT TCGCCGCCGC CCCGGCCGGG CTCGGCCTGA TCGCCAGCGC GGTGCTCATC CACCGCTGGT GGCGGACCGA GCGCAACCTC CCCTGA
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Protein sequence | MTHDGRRRTI PRGGHHHGSH HRARRHRMGI RLRWRLTRDP ATGRFGLLLL LLAGFGVALL VVPRPDPADL PGLADRLGGY APVTAVIGGA LLLVALVPRT FITLASGALF GALEGAAYAL GAALLAAAIG FMVGRVLGRE FVAERIRGRL ARLDGWFTRQ NVLGVVTVRL LPIAGFGLVS YGYGTTGARV LPFLVGSVVA SAPTAFGYAA VGAAVTSPGQ VNWFAAAPAG LGLIASAVLI HRWWRTERNL P
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