| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3428 |
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| Symbol | |
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| ID | 5704109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3955026 |
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| End bp | 3955688 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272855 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001538221 |
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| Protein GI | 159038968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.319038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00618792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACCGCAG GACCGACCCC GGGATCCGGC CCCGCCGGGC CGGTGGACCG TTCGGCCACC
AGCGCGACCG GGCCGGCTGG CCCCGCCGAG ACGCAGGGTG CCGCCAATGC CGTGCCGCCA
CGGCGGCGTG CGGTGTCGAT CCTGCTCGGC GTCGGGCTCA CCGGGCTAGC GCTCGACCTA
CTCACCAAGC ATCTCGCACT GCGGGCTCTG GAAGGCCGGG AGCCGGTCGA ACTGCTGGGC
GGTCTGGTCT ACCTCAGCCT CACCCGGAAC AGCGGCGCGG CATGGAGCAT CGGTGCCGAC
TACACCTGGG TCTTTCCGCT GATCACCATC GTCGTGATCG GCTGGATCCT CTGGACGGCG
CTGCGTCTGC GTTCCCTGCC CTGGGCGGTG GCGCTGGGGC TGGTGCTCGG CGGGGCGCTT
GGCAACCTGA TGGACCGGAT CTTTCGTGCT CCCGGCTGGT TCGTCGGCCA CGTGGTCGAC
ATGATCAGCG TCTTCGAACC GTACGGGCGG GTGTTTCCGG TATTCAACGT GGCCGACAGC
GCCCTGGTCT GCGGGGTGTT TCTCGCAGTG TTCCTCGAAC TGACCGGCCG TCAGCGCGAC
GGCAGCCGGA TCAACCGGCA CGGGCAACCG GTGACCGACG CGCCGCCGCG GGAGCGGGCA
TGA
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| Protein sequence | MTAGPTPGSG PAGPVDRSAT SATGPAGPAE TQGAANAVPP RRRAVSILLG VGLTGLALDL
LTKHLALRAL EGREPVELLG GLVYLSLTRN SGAAWSIGAD YTWVFPLITI VVIGWILWTA
LRLRSLPWAV ALGLVLGGAL GNLMDRIFRA PGWFVGHVVD MISVFEPYGR VFPVFNVADS
ALVCGVFLAV FLELTGRQRD GSRINRHGQP VTDAPPRERA
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