Gene Sare_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3380 
Symbol 
ID5703415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3904766 
End bp3905728 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID641272807 
Producthypothetical protein 
Protein accessionYP_001538173 
Protein GI159038920 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0810275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAAC TGCTCGTCCT TGCGCTCGTC GGGATGGCTG CGCAACTCGT CGACGGAGCC 
CTTGGTATGG GATACGGGCT CACCTCCTCG ACGCTGCTCC TGCTTGCCGG TGTCTCGCCG
GCTGCAGCCT CGGCTTCGGT ACACCTGGCT GAGGTGGGCA CCACCCTCGC AGCAGGTGTC
GCGCACTGGC GGTTCGGCAA CGTCGACTGG CGAGTTGTCG GGCGCATCGC CGTGCCCGGT
GCCCTCGGCG CCTTCGCCGG GGCAACCTTC CTGTCCGCTG TCTCCACCGC CGCCGCCGCG
CCCTGGATGG CGGCCATTCT GTTCACCCTC GGCGCGTACC TGCTGGTGCG CTTCTCTCGG
CCGCTGCGCA CCGGGCAGCG GGTCGGCCGG CTACGCGGTC GCTTCCTCGG CCCACTGGGG
TTGGTCGCCG GCTTCGTCGA CGCCACGGGC GGTGGGGGCT GGGGCCCGGT GGCAACGCCC
GCACTACTGG TCAGCGGTCG GTTGGAGCCC CGAAAAGTAA TCGGCTCGGT GGACACCGCC
GAGTTCGTCG TCGCCGGTGC GGCCAGCGTC GGCTTCCTCA TCGGGCTCGG TTCCGAGGGC
TTCCTGCTGC CGATGGTGGT AGCGCTGCTG GCCGGTGGCC TGATCGCCGC CCCGGTGGCG
GCCTGGCTGG TGCGCCTCGT GCCGGCCCAA CTGCTCGGGG CGGTGGTCGG CGGTGTGATC
GTGCTGACCA ACGCCCGCAC GCTGATGCGT GCCCTCGATT TCGGTGGCGC CGTTCAACCC
GTGGGGTACG CCCTGCTGGC CCTCGCCTGG GGCGTCGCGC TCGCGTTCGC GGTCCGGGCC
ATGGTGCGCG CCCGCCGCGC GCGGGCCGTT GTCGCCGCCC GGCTCACCGA CCCGAACCGG
GACGAGGCTG CAGACGACCC GTACCGGACC GAAGGCGCCA TCGTGTCCGA GTCGGTGCGC
TGA
 
Protein sequence
MRKLLVLALV GMAAQLVDGA LGMGYGLTSS TLLLLAGVSP AAASASVHLA EVGTTLAAGV 
AHWRFGNVDW RVVGRIAVPG ALGAFAGATF LSAVSTAAAA PWMAAILFTL GAYLLVRFSR
PLRTGQRVGR LRGRFLGPLG LVAGFVDATG GGGWGPVATP ALLVSGRLEP RKVIGSVDTA
EFVVAGAASV GFLIGLGSEG FLLPMVVALL AGGLIAAPVA AWLVRLVPAQ LLGAVVGGVI
VLTNARTLMR ALDFGGAVQP VGYALLALAW GVALAFAVRA MVRARRARAV VAARLTDPNR
DEAADDPYRT EGAIVSESVR