Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3303 |
Symbol | |
ID | 5703657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3814696 |
End bp | 3815409 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641272730 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001538097 |
Protein GI | 159038844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.677057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000332886 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCACGA CCGTGACCGG GATGTTTCTG GCCGGGCTGG CCGCCGGGTT CGGAGTGGCC ATCCCGGTCG GCGCCATTGC GGTGCTCGTC ATGGGGCTGG CTGCGCAGAA CTCGTTCCGG GTGGGGGCCG CCGCGGCCCT CGGCGTCGCC ACGGCCGACG GCCTGTATGC GGCCGTCGCC GCGCTCGGTG GGGCCGCGCT GGCCGCGGTA CTCGCCCCGG TCGCCGGCCC CCTACGGGTG GTCGCCGCGG TGGTACTGCT CGCCCTGGCG GCTTACACCG CGGGGCGGGC CCTGCGTTCC GCCCGGCCGA CCGCGGTGGC CGACGCCAAC CCTGGCGCCG AAGCGAGGTC GGACGATCCG GCCGCCGCCA GCGCCTCGCC CGCGCGCCGT CGGGGACTGG AGACGCCACC GCGGGCCTTC GCCGGGGTGC TGGCGTTGAC CCTGCTGAAT CCTGCCACCG TCGTCTACTT CGCGGCGCTC GTGCTCGGCC GTCAGGACTC CGCCGCCCCG GCTCTGTCGA TCGCCGGGGC GTTCGTGCTC GGGGCGTTCC TCGCCTCGGC GAGCTGGCAA CTACTGGTCG CCGGGGGCGG CACACTGGTC GGCCGGATCC TCACCGGTCC GCGCGGCCGG CTCGGCACGG CGCTGGTGTC CAGCACCATC ATCGCCGTGC TTGCCGTCAC CATGCTCCTG GCGGCCGGAC CCGACGTGGG CTAG
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Protein sequence | MSTTVTGMFL AGLAAGFGVA IPVGAIAVLV MGLAAQNSFR VGAAAALGVA TADGLYAAVA ALGGAALAAV LAPVAGPLRV VAAVVLLALA AYTAGRALRS ARPTAVADAN PGAEARSDDP AAASASPARR RGLETPPRAF AGVLALTLLN PATVVYFAAL VLGRQDSAAP ALSIAGAFVL GAFLASASWQ LLVAGGGTLV GRILTGPRGR LGTALVSSTI IAVLAVTMLL AAGPDVG
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