| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3129 |
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| Symbol | |
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| ID | 5706373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3557189 |
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| End bp | 3558733 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641272561 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001537928 |
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| Protein GI | 159038675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.91445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000257265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCTCCC GGCCTGGCCG GTCATCGCCG TCGCGACGGG CCGCCCTGGT CGGCCTGTGT
ACCGCCGCCA CCCTGGTATG GCTCGCGTTC TCCAACCTGG GTGTGGCGCT GCCGACGATC
GCCACCGAGT TGAGCGTCAA CCTGACCGAC ATGCAGTGGG CGAACAACGC CCTGAGTATC
GCCTGCGGCA CACTCCTACT GGCCGGCGGA CGCCTCACCG ACCTCTACGG CCATCGACAG
ATGCTGCTCC TCGGCCTACT GATCTTCGGT GTTGCCGCGC TGGCGACCGC GTTCACACCC
AACCTCGCCG GCCTGGTCAC CGGTCGGGCG ATGATGGGCG TCGGCAGCGC ACTCATCCTG
CCCGCCACGC TAGCCATGAT CCCGGCCCTG TTCGACCGAG CCGAGCAACC CTCAGCATTC
GCCGCATGGG CCGCGGCCAC TTGGGCGGGG CAGGCGGTCG GGCCCGCCAT CGGCGGAACA
CTGACCACCC TGTTGGGCTG GCGGTCGCTG TTCTGGCTCA CCGCACCCGT GGTCCTCGTG
CTGTACCTGA CAATCAGACG CGACGCCCCC ACCGCAACCA GGGGCCACGG ACGAGTCGAC
CTGATCGGGC TCATTACCGG CGCCGGAACG GCACTGTGTC TACTTTTCGC ATTGACCGAG
GGCCAGCAGG TCGGCTTCAA CGACCCGCTC ATCATCGCTT TGTTCGCCGC GACGTTGGCG
CTCGGCGCGG CGTTCGTGTT CGTCGAACTA CGGATCAGCG ACCCGCTGGT GAACCTACGG
CTGTTTCGCA CCCGCAGCTT CGACGGCGCC CTCATCGTCA ACCTCACGAT GAACATGTCC
TTCGCCGGCG CACTGTTCGT GCTGTCCCTC TACCTCCAAG ACGTCCGCGG CTACACCGCA
TTCATCGCCG GCCTGATCCT CATCCCCGCC GCCGCAACAA TCCTGATCTT CAACACCATC
GGCGCCCGAA TTCTCACCCG ACACGACCCC CGCGCCCCCT CAATCTGGGG CCTCGTCCTG
GTCGGCATCG GCAGCATCGC CATCAGCACC CTCCTACCCG CCCTGTCCGT CCTCGCAGTA
ATCCTGGGCC TGCTCATCGT CGGCGCCGGA CTGGGCCTGC TGTCCGTACC CGTCGCCGAC
ACCATCGTCG CAGGCCCACC AACCACCCTC GCCGGCACCG CATCCGGGGT ATACAAAACC
AGCAGCATGC TGGGCGGCGC ACTCGGCGTC GTCCTACTCA CCGCCGCAAC AACCCGCTTC
GGCCGCGCCG AAGCCGCACC AGTCAGCACC GCCGCCGGAC TCACCGAAGC GGAATCCAAC
CAGGTCGTCA ACGCACTGAC CAACTCCCAG ACCGCGAGCG CCATCCTCGA CAAACTCCCA
GCAAGCCAAC GCTCCCTCGT CATCGAGGTG TATCACCAGG CATTCTCCGA CGGGGTGTCC
ACAGCCCTCA TACTCGGAGG CGTGATCGCA CTGGCCGGCG CGGTGCTGGC CGGCTGGATC
TGGCCCCGCA GGAAGGGCCG ACGCGCGAAG GCGACCCGGA CCTGA
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| Protein sequence | MSSRPGRSSP SRRAALVGLC TAATLVWLAF SNLGVALPTI ATELSVNLTD MQWANNALSI
ACGTLLLAGG RLTDLYGHRQ MLLLGLLIFG VAALATAFTP NLAGLVTGRA MMGVGSALIL
PATLAMIPAL FDRAEQPSAF AAWAAATWAG QAVGPAIGGT LTTLLGWRSL FWLTAPVVLV
LYLTIRRDAP TATRGHGRVD LIGLITGAGT ALCLLFALTE GQQVGFNDPL IIALFAATLA
LGAAFVFVEL RISDPLVNLR LFRTRSFDGA LIVNLTMNMS FAGALFVLSL YLQDVRGYTA
FIAGLILIPA AATILIFNTI GARILTRHDP RAPSIWGLVL VGIGSIAIST LLPALSVLAV
ILGLLIVGAG LGLLSVPVAD TIVAGPPTTL AGTASGVYKT SSMLGGALGV VLLTAATTRF
GRAEAAPVST AAGLTEAESN QVVNALTNSQ TASAILDKLP ASQRSLVIEV YHQAFSDGVS
TALILGGVIA LAGAVLAGWI WPRRKGRRAK ATRT
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