Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2975 |
Symbol | |
ID | 5707758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3380366 |
End bp | 3380719 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641272423 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001537791 |
Protein GI | 159038538 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.351973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000108839 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACCTCC CCAAAGACCT GGTGGCGGCT TCGGCCACCC CACTCGTCCT GGCGGTGCTA GAGCAGGGCG ACAGCTACGG GTACGAGATC ATCAATAGCA TCCGCGACCT CTCCGGCGGC GAGCTCGAAT GGAAGCAAGG GATGCTCTAT CCGCTCCTGC ACCGCTTGGC CAGCCAAGGC TTGATTGAGA GCTATCAGGG CGTGTCCGCT GCCGGACGAG TACGCAAGTA CTACCGGCTG CTCCCCGTTG GTCGCCGCCA GCTCGAGACC TGCCGGCAGA ACTTCGATCT CATCAGCTCT ACCCTCGCCG CGCTCGGACG GCTCAACCAC GGAGGCACAC ATGCCACAGC TTGA
|
Protein sequence | MDLPKDLVAA SATPLVLAVL EQGDSYGYEI INSIRDLSGG ELEWKQGMLY PLLHRLASQG LIESYQGVSA AGRVRKYYRL LPVGRRQLET CRQNFDLISS TLAALGRLNH GGTHATA
|
| |