Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2856 |
Symbol | |
ID | 5706642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3240583 |
End bp | 3241395 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641272311 |
Product | amidohydrolase 2 |
Protein accession | YP_001537681 |
Protein GI | 159038428 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.156395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGATCA TCGACGCCTG GATGCAGCAC CCGACGTTGC GGCACTCCAA CCACGAGATG TTCGACTCCC TTCGGCGGTG GACTGGCGGA ATGGTGCTCG AGGAGCCCTT GCCGGTGGAA GTGACGGTCG CGGTACTGGA GGCGGCCGAC GTGGAAATCG GCCTGTCGGC GGCCTGGTAC GGACCGCAGG GGGCACTGAT CAGCAACGAC GAGGTGGCCA GCTTCGTCGC CCAGTCCGAC CGGCGCCTGC GGGGTGTTGC GGGTGTCGAT CTGAGCCGCC CCGTGGATGC GGTGCGGGAG CTGCGGCGCG CGGTCGACGA CCTGGGTTTC GTGGCGCTGC GGGTTGTGCC GTGGCTATGG GGATTGCCAC CCACCGACCG GCTGTACTAC CCGCTGTATG CAGCGTGTGT GGAACTGCGC GTTCCGTTCT GCACGCAGGT GGGCCACACC GGTCCGCTGA GACCCTCAGA GACTGGGCGG CCAATCCCCT ACATCGACCA GGTGGCGCTC GACTTCCCGG AGTTGACCAT TGTTTGCGGC CACATCGGCT ATCCGTGGAC GGCCGAGATG GTCGCCGTCG CCGACAAGCA CGTCAACGTA TACATCGACA CCAGCGCCTA CACCGCTCGC CGCTACCCCA ACGAACTCGT GGAATATCTT CGTGGCCGGG GACGCCGCAA AGTCCTGTTT GGCACGAACT ACCCCATGAT TACTCCTTCG CAGGCGCTGG AGCATCTGGA GCAGCTGGGC CTCGACGAGG AGACGCGCGG CTTGTTCCTG TCCGGCAACG CCCGCCGCCT CTTTGCCTTG TAG
|
Protein sequence | MPIIDAWMQH PTLRHSNHEM FDSLRRWTGG MVLEEPLPVE VTVAVLEAAD VEIGLSAAWY GPQGALISND EVASFVAQSD RRLRGVAGVD LSRPVDAVRE LRRAVDDLGF VALRVVPWLW GLPPTDRLYY PLYAACVELR VPFCTQVGHT GPLRPSETGR PIPYIDQVAL DFPELTIVCG HIGYPWTAEM VAVADKHVNV YIDTSAYTAR RYPNELVEYL RGRGRRKVLF GTNYPMITPS QALEHLEQLG LDEETRGLFL SGNARRLFAL
|
| |