Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2787 |
Symbol | |
ID | 5707866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3168599 |
End bp | 3169186 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272243 |
Product | hypothetical protein |
Protein accession | YP_001537613 |
Protein GI | 159038360 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0142932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000143364 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAAGCA ACGTCACCGG TCGGCGCCTG CGCCCGGCCG TCCTGCTCAC CACCGTTCTG TTGACCGCCG CCGTCACCGG ATGCGGGTCG TCGGGCGACT CGCCGACAGC CGCCCCGAGC CCGTCGGCAA CACCCAGCGT GTCGGCGGAT GCCCCCGCCG GGGTGCTCGG TATCCGCGAC CCGTGGGTGA AGGCCGCCGA CAAGGGGATG ACGGCGGCGT TCGCGACCCT GGTGAACGAC AGCGAGGCCG ACGTTACCCT GACCAGTGTC ACCTCCGAGG TGTCACCGAT GGAGTTGCAC GAGATGGCCA TGAAGGACGG GGAGATGGTG ATGCAGGCCA AGCAGGGCGG CATCGTCGTC AAGGCGAAGA GCAGCCATGT CCTCGAACCC GGCGGCGACC ACCTCATGCT GCTCGACCTG CAGCAGCCGG TCAAGGCGGG CGACGAGCTG GCGTTCACCC TCGCCTTCGC CGATGGGCGC ACCCAGTCGT TCACGGCCGT GGCGAAACCG TTCACCGGCG CCCAGGAGAG CTACGACCCG GGGCACAGCA TGCCGGACAT GTCGATGAGC CCCAGCCCGG CATCGTGA
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Protein sequence | MPSNVTGRRL RPAVLLTTVL LTAAVTGCGS SGDSPTAAPS PSATPSVSAD APAGVLGIRD PWVKAADKGM TAAFATLVND SEADVTLTSV TSEVSPMELH EMAMKDGEMV MQAKQGGIVV KAKSSHVLEP GGDHLMLLDL QQPVKAGDEL AFTLAFADGR TQSFTAVAKP FTGAQESYDP GHSMPDMSMS PSPAS
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