Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2782 |
Symbol | |
ID | 5706174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3164277 |
End bp | 3165185 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272238 |
Product | ABC transporter related |
Protein accession | YP_001537608 |
Protein GI | 159038355 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.561462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00015802 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCACCG CAATCGACAT TCAGCACATC GACAAGGTCT TCGGCCAGGT CAAGGCACTC GACGGCCTTG ACCTACGGGT CGAGGCCGGC ACCGTGCACG GTTTCCTCGG CCCCAACGGG GCCGGCAAGT CCACCACCAT CCGGGTACTG CTGGGGCTGC TCCGGGCCGA CCGCGGCCGG GTCCGGCTGC TCGGTGGCGA CCCATGGACC GACGCGGTGC GACTGCACCG CCGGCTCGCC TACGTGCCCG GCGACGTGGA GCTGTGGCCC AACCTCACCG GCGGCGAGGC GATCGACCTG TTCGCCCGCC TGCGCGGCGG AACCGACCCG GTTCGCCGCG ACGAGTTGTG CCAACGCTTC GACCTCGACC CGCGCAAGAA AGGGCGTACC TATTCGAAGG GCAACCGACA GAAGGTCGCC CTGATCGCGG CGCTGGCCAG CGATGTTGAC CTGCTTCTGC TCGACGAGCC GACCGCCGGA CTGGATCCGC TGATGGAGGC GGTATTCCAG GAGTGCATCC GCGAGGCCCG CGATGCCGGA CGGACCGTCC TGCTGTCCAG CCACATCCTC GCTCAGGTCG AGGTGCTCGC CGACCAGATC TCGATCATCC GGCAGGGGCG GATCGTCGAG ACCGGCTCCC TGACCGACCT GCGTCACCTG ACCCGGACCT CGGTCGACGC GGTCCTCGAC CAACCGCCCA CCACGCTCGC CGCCCTGGCT GGCGTACACG GTCTGCAGGA CACGGACGGC CACGTCCGCT TCGAGGTCGA CGGCGACCAC CTGGCCGCCG TGGTCCGGCA GCTGGGCAAC CTCGGCGTGC GAGGGCTGAC CGTCCGGCCG CCGACCCTGG AACAACTGCT GCTGCGCCAC TACGGTGACC AGCCGGCCCA CGACAAGGCG GTGGCGTGA
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Protein sequence | MPTAIDIQHI DKVFGQVKAL DGLDLRVEAG TVHGFLGPNG AGKSTTIRVL LGLLRADRGR VRLLGGDPWT DAVRLHRRLA YVPGDVELWP NLTGGEAIDL FARLRGGTDP VRRDELCQRF DLDPRKKGRT YSKGNRQKVA LIAALASDVD LLLLDEPTAG LDPLMEAVFQ ECIREARDAG RTVLLSSHIL AQVEVLADQI SIIRQGRIVE TGSLTDLRHL TRTSVDAVLD QPPTTLAALA GVHGLQDTDG HVRFEVDGDH LAAVVRQLGN LGVRGLTVRP PTLEQLLLRH YGDQPAHDKA VA
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