Gene Sare_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2759 
Symbol 
ID5708361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3141573 
End bp3142685 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content74% 
IMG OID641272215 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001537585 
Protein GI159038332 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.249574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0026302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGATAC TTGTTACCGG TGTCGCCGGC TTCGTCGGAT CCCACGTCGC GGACCTGGCC 
GTCGCCGACG GGCACGAGGT GGTGGGCATG GACGCGCTCC TACCGCAGGC CCACGGCGGT
GAGCTACCGG TCTGGTCGCG GGCGCACCAG CCGGTGGTCG GCGACGTACG GGACGCCGCC
CTGCTGGACC GGTTGCTGCC CGGTGTGGAC GCGGTCTGCC ACCAGGCCGC CATGGTCGGG
CACGGCCTCG ACCCGTCCGA CGCCCCCGCG TACGCCAGCC ACAACGACTA CGGCACGGCG
GTGCTGCTGG CCGCCATGCA TCGGGCCGGG GTGCGCCGCC TGGTACTGGC CAGCTCGATG
GTCGTCTACG GGGAGGGGGC CTACCGGTGC TCCACCCACG GCAGCGTCCG ACCGACGCCG
CGTCGCCCCG ACGACCTGGC CGTCGGTCGG TACGACCCGA CCTGTCCCCA CTGCCACCAG
GCCCTCAGCC CCGGCCTGGT ACCGGAGGAC GCGCCGGTCG AGCCGCGCAG CACGTACGCG
GCCAGCAAGC TGGCCCAGGA ACATCTGGCC GCTGCCTGGG CCCGGCAGGC GGGTGGCGGA
TGGGCCCTGC GGTACCACAA CGTCTATGGG CCGCGAATGC CCCGCGACAC CCCCTACGCG
GGGGTCGCGT CGATCTTTCG CTCCGCATTG GCGGCGGGGA GGGCACCCCG GGTGCTGGAA
GACGGCCGGC AGCGTCGCGA CTTCGTCCAC GTCACCGACG TGGCGCGGGC GAACCTGCTG
GCGCTGCAGA CGGCGCCTCC GGACGGTGAC CTGGTGCCGG TGAACATCTG CTCGGGTGAG
CCGCGGACCG TCGCCGACCT GGCCAACACC CTCGCCAAGG CGATGGATGG GCCGGCGCCG
GTGGTGGTCG GCGGTGCCCG TGGCGCCGAC GTGCGGCACG TGGTCGCCGA TCCTCGCCGG
GCCACCAACC TGCTCGGCTA CACCGCGCGG GTCGGGTTCG CCGAGGGAGT GGCCGGGTTC
GCTCACGATC CGCTGCGGGA GCCGGCCGCC GTGCGGGTTC CGTCCGTGGC CGGGCCGGTC
GCCGAGCCGG AGCCCGCAAC GTTGCCGGTC TGA
 
Protein sequence
MRILVTGVAG FVGSHVADLA VADGHEVVGM DALLPQAHGG ELPVWSRAHQ PVVGDVRDAA 
LLDRLLPGVD AVCHQAAMVG HGLDPSDAPA YASHNDYGTA VLLAAMHRAG VRRLVLASSM
VVYGEGAYRC STHGSVRPTP RRPDDLAVGR YDPTCPHCHQ ALSPGLVPED APVEPRSTYA
ASKLAQEHLA AAWARQAGGG WALRYHNVYG PRMPRDTPYA GVASIFRSAL AAGRAPRVLE
DGRQRRDFVH VTDVARANLL ALQTAPPDGD LVPVNICSGE PRTVADLANT LAKAMDGPAP
VVVGGARGAD VRHVVADPRR ATNLLGYTAR VGFAEGVAGF AHDPLREPAA VRVPSVAGPV
AEPEPATLPV