Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2759 |
Symbol | |
ID | 5708361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3141573 |
End bp | 3142685 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641272215 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001537585 |
Protein GI | 159038332 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.249574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0026302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGGATAC TTGTTACCGG TGTCGCCGGC TTCGTCGGAT CCCACGTCGC GGACCTGGCC GTCGCCGACG GGCACGAGGT GGTGGGCATG GACGCGCTCC TACCGCAGGC CCACGGCGGT GAGCTACCGG TCTGGTCGCG GGCGCACCAG CCGGTGGTCG GCGACGTACG GGACGCCGCC CTGCTGGACC GGTTGCTGCC CGGTGTGGAC GCGGTCTGCC ACCAGGCCGC CATGGTCGGG CACGGCCTCG ACCCGTCCGA CGCCCCCGCG TACGCCAGCC ACAACGACTA CGGCACGGCG GTGCTGCTGG CCGCCATGCA TCGGGCCGGG GTGCGCCGCC TGGTACTGGC CAGCTCGATG GTCGTCTACG GGGAGGGGGC CTACCGGTGC TCCACCCACG GCAGCGTCCG ACCGACGCCG CGTCGCCCCG ACGACCTGGC CGTCGGTCGG TACGACCCGA CCTGTCCCCA CTGCCACCAG GCCCTCAGCC CCGGCCTGGT ACCGGAGGAC GCGCCGGTCG AGCCGCGCAG CACGTACGCG GCCAGCAAGC TGGCCCAGGA ACATCTGGCC GCTGCCTGGG CCCGGCAGGC GGGTGGCGGA TGGGCCCTGC GGTACCACAA CGTCTATGGG CCGCGAATGC CCCGCGACAC CCCCTACGCG GGGGTCGCGT CGATCTTTCG CTCCGCATTG GCGGCGGGGA GGGCACCCCG GGTGCTGGAA GACGGCCGGC AGCGTCGCGA CTTCGTCCAC GTCACCGACG TGGCGCGGGC GAACCTGCTG GCGCTGCAGA CGGCGCCTCC GGACGGTGAC CTGGTGCCGG TGAACATCTG CTCGGGTGAG CCGCGGACCG TCGCCGACCT GGCCAACACC CTCGCCAAGG CGATGGATGG GCCGGCGCCG GTGGTGGTCG GCGGTGCCCG TGGCGCCGAC GTGCGGCACG TGGTCGCCGA TCCTCGCCGG GCCACCAACC TGCTCGGCTA CACCGCGCGG GTCGGGTTCG CCGAGGGAGT GGCCGGGTTC GCTCACGATC CGCTGCGGGA GCCGGCCGCC GTGCGGGTTC CGTCCGTGGC CGGGCCGGTC GCCGAGCCGG AGCCCGCAAC GTTGCCGGTC TGA
|
Protein sequence | MRILVTGVAG FVGSHVADLA VADGHEVVGM DALLPQAHGG ELPVWSRAHQ PVVGDVRDAA LLDRLLPGVD AVCHQAAMVG HGLDPSDAPA YASHNDYGTA VLLAAMHRAG VRRLVLASSM VVYGEGAYRC STHGSVRPTP RRPDDLAVGR YDPTCPHCHQ ALSPGLVPED APVEPRSTYA ASKLAQEHLA AAWARQAGGG WALRYHNVYG PRMPRDTPYA GVASIFRSAL AAGRAPRVLE DGRQRRDFVH VTDVARANLL ALQTAPPDGD LVPVNICSGE PRTVADLANT LAKAMDGPAP VVVGGARGAD VRHVVADPRR ATNLLGYTAR VGFAEGVAGF AHDPLREPAA VRVPSVAGPV AEPEPATLPV
|
| |