| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2758 |
|---|
| Symbol | |
|---|
| ID | 5708360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 3140839 |
|---|
| End bp | 3141492 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641272214 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001537584 |
|---|
| Protein GI | 159038331 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.524358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00766091 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTGT CGCCGTCGGA CCTGACCGGA CGGGCACGGC TGCGCGAAGC GGCCCTGCGC
CTGTTCGCGC AGCGCGGCTT CGCCGCCACC TCGGCCCGCG CGGTGGCTGC CGAGGCCGGT
CTGTCTCCGG CCCTGGTGAT GCACCACTTC GGCTCCAAGG AAGGGCTGCG GGCCGCCGTC
GACGAGCAGG TCCTGGCCCG ACTCGGCGCC GCCCTACGGG AACTGGACCC GGGTGGCGGG
GATCTGATGG CGTCACTGGG TGAGGTGTCC GCGCGGATGT TCGGCGCCGA TCCGGTGCTG
CGCGGCTATC TGCGTCGGGT GCTGCAGGAG GACAGTCCGG CCAGTGCGGC GCTGTTCGGC
CGCCTGCTGG ACAGTGCGCG CACCGAGTTG GAGCGGCTGA TCGCGGCCGA GGGCGGCCGG
ACGGATGCGG ATCTGCAGTG GGCACCGTTC CAGATGCTGT GCCTGATCGT AGGCCCGCTG
CTGCTGGAAC CGGTCATGCA ACCCAACCTG GACCGGCCCA TGTTCGACGT GCAAGTGCTG
GCCCGCCGCA GCGCCGCCAA CCAACACCTC CTGCGGCTGG GCCTGTTCGG GTCCGACCAG
TCAACCGATG CGCCAGACCC AGCGAAGCCC GCCCAGCGCG CCCGGCGGCG ATGA
|
|---|
| Protein sequence | MHVSPSDLTG RARLREAALR LFAQRGFAAT SARAVAAEAG LSPALVMHHF GSKEGLRAAV
DEQVLARLGA ALRELDPGGG DLMASLGEVS ARMFGADPVL RGYLRRVLQE DSPASAALFG
RLLDSARTEL ERLIAAEGGR TDADLQWAPF QMLCLIVGPL LLEPVMQPNL DRPMFDVQVL
ARRSAANQHL LRLGLFGSDQ STDAPDPAKP AQRARRR
|
|---|
| |