Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2613 |
Symbol | |
ID | 5703368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2978948 |
End bp | 2979607 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272074 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001537444 |
Protein GI | 159038191 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.629122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCG ACACGAACGA CGTGCTCGAC GCGGTGGGGC CACGACTGCG TGCCCTGCGC CGGCACCGTG GCCTCACCCT CGCTGACGTC TCGACGACAA CCGGTGTGTC CGAGAGCACC CTGTCCCGCC TGGAGGGCGG GCAGCGCCGG GCGACCCTGG AGTTGCTGCT GCCCCTGGCC CGCATCTACA ACGTTCCGTT GGACGACCTC GTCGGCGCCC CGCGCACCGG TGACCCCCGC ATCCACCTCA CGCCGATCCG CCGGTTCGGT ATGGCCTTCG TGCCCTTGTC CCGGCGACCC GGTGGGGTGC AGGCATTCAA AATGATCATT CCAGCCCGGC GAGAACCACT CGAGCCGACC CCGAAAACCC ATGACGGCTT CGAATGGCTG TACGTGCTCA ACGGGCAGCT GAGACTGATG CTCGGAGAAC GCGACCTGAC CCTGTCCCCC GGCGAGGCGG CCGAGTTCGA CACGTCGCTA CCGCACTGGC TGGGCAGCGC GGACGGCGCA GCGGTCGAGC TGCTCATCCT GTTCGACCCG CAAGGCGTAC GCACACACAT CCACGCCGAC ACGCACCGGC CGCAGCGCGC GACGAGTTCC AGCGCTGAAC CCGCTGAGGG AACGACGATC AGAGGTACTG GTGCCGCCAA ACGGGAATGA
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Protein sequence | MDSDTNDVLD AVGPRLRALR RHRGLTLADV STTTGVSEST LSRLEGGQRR ATLELLLPLA RIYNVPLDDL VGAPRTGDPR IHLTPIRRFG MAFVPLSRRP GGVQAFKMII PARREPLEPT PKTHDGFEWL YVLNGQLRLM LGERDLTLSP GEAAEFDTSL PHWLGSADGA AVELLILFDP QGVRTHIHAD THRPQRATSS SAEPAEGTTI RGTGAAKRE
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