| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2557 |
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| Symbol | |
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| ID | 5708423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2911964 |
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| End bp | 2913214 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641272020 |
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| Product | lycopene beta and epsilon cyclase |
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| Protein accession | YP_001537390 |
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| Protein GI | 159038137 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.329611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000286937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCCACCG CCCCACCGGT CGACGTCGAC CTCGCCCTGG TCGGTGGCGG CGGCGCGGGG
TCACTCGTGC TCGCCGCCCT GGATCGGTGC GGCGTGCGCG GTCTGCGGGT GGCGGTGGTC
GATCCGGTGC GTCGTCGCGG ACAGGACCGG ACCTGGGCGT TCTGGGGCCG TCCCGACGAC
AGGCTCGATT CGCTGTTGGC GGCGAGCTGG TCACAGGTGG AGGTGGCGAC ACCTGGGCGG
CGCCGCGTGC TCGACCTCGC CCCGCTGCGG TACGCGATGC TGCGCTCGGC CGCGGTCTAC
GACCAGGCCG CCACCGCCGA GCACCGCCTC GGCGCGGTCC GCGTCGCCGC CCCGGCCCGA
GCTGTCGAGG ACGATGGTGA CCGGGTGACG GTCCGCGCCG GCGGGGCGAC TGTGCGCGCG
TCCTGGGTCC TCGACTCCCG GCCCCGGCCG CCCCGCCGGG TCGGGCGCAC CAACTGGCTG
CAACACTTCC GCGGCTGGTG GCTCGAGGCC GATCGGCCGC TGTTCGACCC GGGTCGGGCG
GTGCTGATGG ATTTCCGCAC CCCGCAGCCG GCACGGGGCG TGTCGTTCGG GTACCTGTTG
CCGGTCACCG ACCGGTACGC GCTGGTCGAG TACACCGAGT TCACTCCCGG CCTGCTCACC
GACGCCGGCT ACGACGCGGC GTTGGCTGGG TACCGGGACC AACTCGGGCT GGACCCGGGC
CGGCTGAGGG TGCGGGAGGT GGAGAACGGG GTGATCCCGA TGACCGATGG CCGGTTCGAC
CTGCGGCCGT CGCCCCGGGT GGTCCGTCTC GGTACCGCCG GTGGTGCCAC CCGACCCTCC
ACCGGCTTCA CGTTCGCCGC CATGTACCGG CAGGCGGGGC AGATCGCCGA GGCGCTCGCC
GCCGGGCGGG CGCCGGTCCC GGCGCCCGCG TACCCCCGCC GACACCGGTG GCTGGACGCG
GTCGCGCTGC GGGCACTGGA CCGCGGTGGG GTGGGCGGTC CGGACTTCTT CGATCGGCTC
TTCGACCGCA ATCCGGCCGA GCGGGTACTG CGCTTCCTTG ACGGGACCAC CAGCCCGGCC
GAGGAGGTGG CGCTGATGGG CACCACCCGG CTATCGCCGA TGGTCGCCGC CACCGTCGGT
GACGCCGCCG CCCGGCTGCG GGACCGGGTC GTGCCGTGGC GGCGTCCCAC CACCTGGCAG
ATACCGCCGC CGGTGACCGG CGCGACGCGG CGCTCCCCGC CGCAGAGGTG A
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| Protein sequence | MPTAPPVDVD LALVGGGGAG SLVLAALDRC GVRGLRVAVV DPVRRRGQDR TWAFWGRPDD
RLDSLLAASW SQVEVATPGR RRVLDLAPLR YAMLRSAAVY DQAATAEHRL GAVRVAAPAR
AVEDDGDRVT VRAGGATVRA SWVLDSRPRP PRRVGRTNWL QHFRGWWLEA DRPLFDPGRA
VLMDFRTPQP ARGVSFGYLL PVTDRYALVE YTEFTPGLLT DAGYDAALAG YRDQLGLDPG
RLRVREVENG VIPMTDGRFD LRPSPRVVRL GTAGGATRPS TGFTFAAMYR QAGQIAEALA
AGRAPVPAPA YPRRHRWLDA VALRALDRGG VGGPDFFDRL FDRNPAERVL RFLDGTTSPA
EEVALMGTTR LSPMVAATVG DAAARLRDRV VPWRRPTTWQ IPPPVTGATR RSPPQR
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