| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2542 |
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| Symbol | |
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| ID | 5706864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2894724 |
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| End bp | 2896169 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641272005 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001537375 |
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| Protein GI | 159038122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000721597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTTGAAC GCCCTGCCCC GGGCCCGGGG ACCGCCCCGC TCGATGCCGA TCGGGGCGGG
CAACAACGCC GAGGGCCGGC GCTCGGCATC GGTCTGGTCG CCGTGTTCAT GACGCTGCTC
GACGTGAGCA TCGTCAACGT CGCCATCCCG TCCATGGAGC GGGCGCTCGA CGTCGCCCCC
AGCGATGTGC AGTGGGTGCT GTCCGGGTAC GCACTGACGT TCGGGCTGAT GCTGGTACCC
GCCGGCCGTT TCGGCGACGG CCACGGACGG CGGACCGCGT TCGTCGTCGG AATCGTCCTG
TTCACGATCA CCAGCGCCGG CGCAGGGCTG GCGCCGACCG CAACCTGGCT GGTCGCCGCC
CGGCTACTGC AGGGAGCTGC CGCTGGCATA GTCAACCCCC AGGTCACCGG ACTGATCCAG
GAGCTGTTCC GAGGTCCCGA GCGGGCCCGT CCGTTCGGGC TGCTCGGCGC GACCGTGGCC
ATCTCCACCG CAGTCGGGCC GTTGCTCGGT GGCCTACTCA TCCACATCGG CGGCGAGGAG
CACGGATGGC GGTGGGTCTT CTTCGTCAAC GTACCGATCG GTGTGCTCAC CGCCGTCCTC
GGCTGGCGCC TGCTTCCCCG CCGCGCCCAC CGTGCCCGTG ACCGCCACCA GTTCGACCCG
GTCGGGGTGC TACTGCTCGG CGCCGGCGTC CTGCTCGTGC TGCTGCCGCT GGTGCAGCAG
CACTGGCAGG GTCCGACCAA GTGGCTGTTG CTGCCGGCCG GCCTACTGAC GCTGGCCGGC
TTCGCCGGCT GGGAACGGTG GTACGCCCGC CGCCGCGAAC CGTTGTTCGA CCTACGCCTG
CTCGGCATCC GTTCGTACCG GCTCGGCGTC GTGGTCGCCC TGCTGTACTT CGGCGGATTC
ACCGCCATCT TCTTCGTTCT CACGGTGTAC CTGCAGAACG GCCTTGGGCA CAGCGCACTC
GCCGCCGGGT TGGCCAGCAC ACCGTTCACG GTCGGCTTCG CCATCGCTTC CGTGGTGGGC
GGGCGGGTCG TCAACCGCTT CGGTCGGCCA CTGGTCGCGG TCGGCCTGGC CACCGTCGTG
GTCAGCCTCG TCGTCGTGGT CCTCGTCGTC AACCGGGTGC CCACCGGCGC GACGGTCTCC
TGGTGGACCG CCACCCCGCT GTTCGTGGCC GGGCTCGGCA GCGGCCTGGT CATCACGCCG
AACCAGGCCC TCACCCTCGC CCAGGTTCCG GTGCCGCGCG CCGGCGGCGG CGCCGGTTTG
CTACAGACCG GCCAACGTAT CGGGTCCGCC GCCGGCATTG CCACGGTCGG CAGTGTCATC
TTCTCCGCCC AGGGCGCCAC CGGTGACTGG TCGGTCGCCT TCCACCATGC GATGCTCCTG
ACCAGCGGTG TCGTCGCCAT CGCGCTCTGC GTTGCGCTGA CCGACATCCT CATCGACCGC
CGCTGA
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| Protein sequence | MVERPAPGPG TAPLDADRGG QQRRGPALGI GLVAVFMTLL DVSIVNVAIP SMERALDVAP
SDVQWVLSGY ALTFGLMLVP AGRFGDGHGR RTAFVVGIVL FTITSAGAGL APTATWLVAA
RLLQGAAAGI VNPQVTGLIQ ELFRGPERAR PFGLLGATVA ISTAVGPLLG GLLIHIGGEE
HGWRWVFFVN VPIGVLTAVL GWRLLPRRAH RARDRHQFDP VGVLLLGAGV LLVLLPLVQQ
HWQGPTKWLL LPAGLLTLAG FAGWERWYAR RREPLFDLRL LGIRSYRLGV VVALLYFGGF
TAIFFVLTVY LQNGLGHSAL AAGLASTPFT VGFAIASVVG GRVVNRFGRP LVAVGLATVV
VSLVVVVLVV NRVPTGATVS WWTATPLFVA GLGSGLVITP NQALTLAQVP VPRAGGGAGL
LQTGQRIGSA AGIATVGSVI FSAQGATGDW SVAFHHAMLL TSGVVAIALC VALTDILIDR
R
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