| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2378 |
|---|
| Symbol | |
|---|
| ID | 5705119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2733978 |
|---|
| End bp | 2734484 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641271856 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001537227 |
|---|
| Protein GI | 159037974 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.258345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0022466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGAGA TCGACCGCGC CATCGTCGCT GCGCTGGCCG TGGACGGCCG GCTGTCGTAC
ACCGACCTCG CGGAACGGGT GGGGTTGTCG GTTTCTGCGG TGCACCAGCG GGTTCGTCGG
CTGGAGCAGC GTGGGGTTAT CGGAGGGTAC GCGGCCCGGG TGTCGTTCGA GGCGCTGGAT
CTGCCGTTGA CGGCTTTTGT GGCGATCCGG CCGTTCGATC CGTCGCAGCC GGACGATGCG
CCGGAACGGC TGGCTCACCT GCCGGAGATC GATTCGTGCT ATTCGGTCGC GGGAGAGGAT
TTCTACCTGC TGTTGCTGCG GGTGGCCGGT CCGGCGGACC TGGAGCGGGT GCTCCAGGAG
ATCCGGATGG CGGCGAGTGT GACCACCCGG ACCACGGTGG TGTTGTCGAC GCCCTATGAG
GGCCGTCCAC CGAAGATCAG TGCCGAGTCG CCCGGGCGGT CCCGGTCGCG GGGGCCGGGG
GAGCCGGCTG GTTCCACCGA CGGATGA
|
|---|
| Protein sequence | MEEIDRAIVA ALAVDGRLSY TDLAERVGLS VSAVHQRVRR LEQRGVIGGY AARVSFEALD
LPLTAFVAIR PFDPSQPDDA PERLAHLPEI DSCYSVAGED FYLLLLRVAG PADLERVLQE
IRMAASVTTR TTVVLSTPYE GRPPKISAES PGRSRSRGPG EPAGSTDG
|
|---|
| |