| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2373 |
|---|
| Symbol | |
|---|
| ID | 5705114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2726819 |
|---|
| End bp | 2727580 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641271851 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001537222 |
|---|
| Protein GI | 159037969 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00605014 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACC GTACCGAACC CGCCAAGACA CCCGCCCCGG GCCGTGTCAC TGTCCCGACG
GCCTCCCGTC GGCCCGTGGA GGCGGTGTTC TTCGACTTCC ACGGCACGCT CGCGCAGGTG
GAGGAGGCCA CCGCGTGGGT GACCGCGGCG GCTGCCGCCT GCGGAACCAC GCTCGACCGG
GCACGCGCCA CCGCACTCGC CGATCGGCTG CTCACCGCCG GTCGAGCCGG CGGACCGCTG
CCTTCCCGGA TCCCGCCCGC GCTGGCCGAG CTCTGGGCCG ACCGGGATCT GTACCCGCAC
GCGCATCGCG GCGCATACAC GGGGCTCGCG GCAACGGTTG ACACCGGTAT CGACGGGCTC
GCCGACGCGC TCTACGAGCG GGGGCTGGTG CCGGAGGGCT GGGTGCCGTA CCCGGATGCC
GCCCCCACCC TGACCGCGCT GCGCGCCGCC GGGGTGCGGG TGGGCGTGGT CAGCAACATC
GGCTTCGACA TCCGACCACT CTTCACCGCG TGGAAGCTCG CCGACCTGGT GGATGAGTAT
GTGCTGTCCT ACGAGGTAGG TCGCTGTAAG CCTGACCCGG GTATCTTCCT GCGCGCCTGC
GCAGTGCTGA CGGTCGACCC GGAACGTGCG CTGATGGTCG GGGACACCCC GGCCGACGCG
GGCGCGGTGG CGGCCGGCTG CGCGGTGCTG GTGCTCCCGA CCGCCGAGGT CGGCCGTCCC
AACGGCCTGG GCGCGGTGCT GGACCTGGCC GTGCCGGGCT GA
|
|---|
| Protein sequence | MPDRTEPAKT PAPGRVTVPT ASRRPVEAVF FDFHGTLAQV EEATAWVTAA AAACGTTLDR
ARATALADRL LTAGRAGGPL PSRIPPALAE LWADRDLYPH AHRGAYTGLA ATVDTGIDGL
ADALYERGLV PEGWVPYPDA APTLTALRAA GVRVGVVSNI GFDIRPLFTA WKLADLVDEY
VLSYEVGRCK PDPGIFLRAC AVLTVDPERA LMVGDTPADA GAVAAGCAVL VLPTAEVGRP
NGLGAVLDLA VPG
|
|---|
| |