Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2286 |
Symbol | |
ID | 5705876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2626342 |
End bp | 2627205 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641271764 |
Product | NmrA family protein |
Protein accession | YP_001537135 |
Protein GI | 159037882 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.159289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0244583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATACA TTGTGCATGG CGCGACCGGC GCCCAGGGCT TCCCCGTCCT GTCCGCTCTT CGGGCCGCGG GCAGGCAAGC GGTCGCGGCA GTCCGCGACA CCTCCTCGGT GCCCGACGGA TTCGAGTCGG CCGAGGTCGA CCTGGCGGAC GTCGACTCGT TGGCCGCGGC CTACAGGGGC GCGGATGGTG TGTTCGTCCA CCTACCGTTG GGCGCACCGG CCGACCTCGG CAGGTACGCC GACGTGGTCG CGGCGGCAGT CGCGAGGGCC CGACCCCGCC GGGTGGTCAT CTCCACCAGT GGTCAGATCG TCGACCAGCC CGGGACGCCG CTGCAAGCCG CACCGGGAAG CCCGATCATC GGCCTCATTC GCGGGGTCGA GGCGAGTGGG ATCTCGACGG CGGTCGTTGC TCCGCGTCTC TACCTGGAGA ATCTGCTGCT GCCCGTCGTC GCGGGGCCCG TCCGGGCGGA GGGGATCCTG CGTTATCCGC TTCCAGGAGC GTATCCGGTG TCGTGGAGTT CCCACCTGGA TGTCGCGGAC GTCGTCGCCC GGCTACTGAC GGACGTGACC GTCGTGGGTA CGGTCGCTGT CGGGCATCGA CCCGGCTTGG CCGGGACTGA CCTGGCCGAC GGGTTCTCCG CCTATCTGGG AACCGACGTG CGCTATGCGG CCATCACGCC GGCCGTGTTC GGTGGCTTGA TCACCCCGCT CTTCGGTGCC GCTGCCAGCG CCGGTGTGGT GGGTCTGTAC GAGCTGTTGA ACGCCCAGGC CGGGAACACC ATCGCGGAGG AGAACAGCGC GCAGCACCTC CTCGGCATCG CTCCACGTGC CGTCGCCGAC TGGCTTGCTC AGGTCCGCGC CTGA
|
Protein sequence | MSYIVHGATG AQGFPVLSAL RAAGRQAVAA VRDTSSVPDG FESAEVDLAD VDSLAAAYRG ADGVFVHLPL GAPADLGRYA DVVAAAVARA RPRRVVISTS GQIVDQPGTP LQAAPGSPII GLIRGVEASG ISTAVVAPRL YLENLLLPVV AGPVRAEGIL RYPLPGAYPV SWSSHLDVAD VVARLLTDVT VVGTVAVGHR PGLAGTDLAD GFSAYLGTDV RYAAITPAVF GGLITPLFGA AASAGVVGLY ELLNAQAGNT IAEENSAQHL LGIAPRAVAD WLAQVRA
|
| |