Gene Sare_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2243 
Symbol 
ID5705869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2579754 
End bp2580116 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content72% 
IMG OID641271723 
Productanti-sigma-factor antagonist 
Protein accessionYP_001537094 
Protein GI159037841 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.132935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0584008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGC GGGGCGACCG GTTCTACATC GAGGTCAGCG AGCGTGGACG CGTGGTGGAT 
GTGCGGGCCA CCGGTGAGGT GGACATTGCC ACGGTGGGGG CGCTGCGGTC AGTGCTCTGG
GCCGCGCCGG CCGATTCGGT GCTGCGGCTC GACCTGACCG GGGTTCGCGT CCTCTCCGCC
GCTGGAGTTC GCGCACTGGT CGCCGCCCAC CTGCGGCTCC GTGCTGGCGG TGGGGAACTG
GTGTTGGTGC GTCCCGGACC CACGGTGGCT CGGGTCCTGC GGGCCACCGG GTTGCACCGG
GTGGTCCGGG TCGTGACCGA CGCGCCCGAC CCGATCGCCG ACCGTGCCCT CATCGCCGCC
TGA
 
Protein sequence
MGKRGDRFYI EVSERGRVVD VRATGEVDIA TVGALRSVLW AAPADSVLRL DLTGVRVLSA 
AGVRALVAAH LRLRAGGGEL VLVRPGPTVA RVLRATGLHR VVRVVTDAPD PIADRALIAA