| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2230 |
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| Symbol | |
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| ID | 5704293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2566669 |
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| End bp | 2567316 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271710 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001537081 |
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| Protein GI | 159037828 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0737618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.167136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGATC CGCTGACGAT CGCATCCGGG GTCTGCGCCG CGGGTGCCCT CGTCTCCTCC
TGGCAGCTAC ACCGCCGGGC GGTGCGCGCC GAGACAGAGA TCGCCGTCCT CCAAGCCGAA
CTCGCCGCCG AACGCCACGC GGCCAGCCAT GACCCACTCA CCGGCCTACC CAACCGGCGC
GCCTTCCACC GACTGGCCGC CGCCCTGCTG ACCCGGGCCG ACAGTCGGCC ACTCATCGCC
GTCGTCCTCG ATCTCGACGA CTTCAAGCAG ATCAACGACC GCTACGGGCA CGCCGCCGGC
GACCAGGTGC TGATCAACGT TGCCCAGCGG CTCTCCGCCT TCGCCGGCGA CGACCCGGTG
GCCCGGCTCG GCGGTGACGA GTTCGCCGGG CTGCTCACCG CTCCCGACAT CGAACGAAGG
TGGCTCGAGC ACGCCACCCG TCGGCTACAG AACCTCCTGG CCGCGCCGAT CCCACTACAC
CGCGCCAACG TGCGGGTGAC GGCCTCGGTC GGGTTGGCTC CGGTGTCCTG CCCTACCCAA
CTCTCCGAAG CACTGGACCG GGCCGACGCA GCGATGTACC GGGCGAAGAG CATCGACTCG
TCCCACCCAC GCCGACTCCT CGACAGCGCG GGCACCGGCG AACGCTGA
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| Protein sequence | MPDPLTIASG VCAAGALVSS WQLHRRAVRA ETEIAVLQAE LAAERHAASH DPLTGLPNRR
AFHRLAAALL TRADSRPLIA VVLDLDDFKQ INDRYGHAAG DQVLINVAQR LSAFAGDDPV
ARLGGDEFAG LLTAPDIERR WLEHATRRLQ NLLAAPIPLH RANVRVTASV GLAPVSCPTQ
LSEALDRADA AMYRAKSIDS SHPRRLLDSA GTGER
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