| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2127 |
|---|
| Symbol | |
|---|
| ID | 5704753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2449736 |
|---|
| End bp | 2450542 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271612 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001536983 |
|---|
| Protein GI | 159037730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0935212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.339255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG TACCGGAGGT ACTGGCGGAA TTCATCGTGA GCGAGATTCG CCTCGCGAGA
GGCGCGGCGG GCATGACCCA GGACGTCTTC GGGCGTGCGG CTGGATACAC CGCCTCACAT
GTCAGTGCGG TGGAGAACGG CACCCGGGCG CTGACAGTCG ACTTCATCCG GGGCGCGGAT
CGCGCGCTCA ACACCGGTGG TCTGTTCCGG CGCCTGGCCA CCAGGCTGGG TGCCCCGTCC
TGGTTTCTGC GCTGGCTGGA CGCGGAACGC ACCGCGACCC AACTTCGCTA TTTCGAGCCC
ATCCTGATCC CGGGCTTGTT GCAGACGGAG CACTACGCAA GGACGGTACT ACGCGCCGAC
GACAGCCTCA CCGACGCTGA GGTCGAGCAG CTGACGGCCG CCCGGATGGA CCGACAGAAG
GCCCTGACCG GCGATCGGCC GCCGCAACTC GTCGCGGTGC TGGACGAGGG TGCCCTTCGC
CGCACCGGCG ACAGTTTCAG CGGGATCATG GCGCAGCAGA TCGCCCACCT GCGCACCATG
ACCGAGCTAC CGCACGTGCA CGTGCTGATC ATCCCGGCCA CCAGCGGAAT ACACGTCGGA
CTGTCGGGAC CGTTCGCGCT GGCCCGGTCG AGTGAGGGGC AGTGGGTCGG CCATCTGGAA
AATCAGCTCG GCGGAGAGGC GGTCGACAAG GACGAGGATG TGGCTAAGCT TCAGCTCATG
TGGGAGAGCG TCCGCAACGA AGCTCTGCCG CGCAGTGCGT CCGTCGACCT GTTGAAGGAA
GTTGAGACCT ACCATGGACC TCAATAG
|
|---|
| Protein sequence | MTDVPEVLAE FIVSEIRLAR GAAGMTQDVF GRAAGYTASH VSAVENGTRA LTVDFIRGAD
RALNTGGLFR RLATRLGAPS WFLRWLDAER TATQLRYFEP ILIPGLLQTE HYARTVLRAD
DSLTDAEVEQ LTAARMDRQK ALTGDRPPQL VAVLDEGALR RTGDSFSGIM AQQIAHLRTM
TELPHVHVLI IPATSGIHVG LSGPFALARS SEGQWVGHLE NQLGGEAVDK DEDVAKLQLM
WESVRNEALP RSASVDLLKE VETYHGPQ
|
|---|
| |