| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2087 |
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| Symbol | |
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| ID | 5704666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2401345 |
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| End bp | 2402301 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641271572 |
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| Product | sphingomyelin phosphodiesterase |
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| Protein accession | YP_001536943 |
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| Protein GI | 159037690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR03395] sphingomyelin phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.213788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.145093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAC TGCAGGGTCT GCTACTCGCC GTCGTTCTCG CCGCGACTGG ACTAGTCGCC
TCCACCGGGG CCGCCCAGGC TGCACCGGCG CCACTGAAGG TACTGACACA CAACGTGATG
CTTCTGCCAC AGTCGCTCTA CCCCAACTGG GGTCAGGTCA CGCGGTCCGA CCTTATTTCC
GAGGCCGACT ACATCACCGG CCGAGACATC GTTGTTCTCC AAGAAATGTT CGACAACGAG
GCATCCAACC GACTCAAGGA TCGTCTCGCC GCCCAGTACC CCTATCAGAC ACCTGTCCTC
GGCCGGTCGC GGTCCGGCTG GGATGCCACG ATGGGGGCGT ACTCCAACGT GACCCCGGAG
GATGGCGGGG TCACGATCCT GAGTAAGTGG CCGATCCTGG AAAAAATCCA ATACGTCTAT
GCCGATGGCT GCGGTGCCGA CTGGTTTTCC AACAAGGGAT TCGTCTACGC CCGCCTCGAT
GTCAACGGAG CCCCCTTACA CGTGGTGGGT ACGCACGCTC AGGCAGCCGA CACTGGCTGC
GCCGACGGCA CCGGCGCCGG AGTCCGGGCA GCGCAGTTCG ACGAACTCCG CGCCTTCCTT
GACGCCCGCC TCATTCCAAC AGGTGAACAG GTCATCATCA CCGGCGACCT GAATGTTGAC
CGCTACTCCG CCGAATACGC AGGCATGTTG ACCCGGCTCG ACGTCAGCGA CACCTCGTTC
ACCGGCCACC CGTACTCCTG GGACTCTGCG CGCAACGCCA TGGCCGACTA CAACGACGAC
CGGAACAGCC GTCAACAGTT GGACTACGTG ATGCAGCGCA ACGGCCATGC CCGACATGGC
TCAGGTGATA ACCAGACCCT GGCTGTCAAT GCACCGAAGT GGTGTGTGAC CAGCTGGTTC
GTTCGCTACT GCTACACCGA CTACGCCGAC CACTATCCGG TCGCGGCAAA CGTCTGA
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| Protein sequence | MKRLQGLLLA VVLAATGLVA STGAAQAAPA PLKVLTHNVM LLPQSLYPNW GQVTRSDLIS
EADYITGRDI VVLQEMFDNE ASNRLKDRLA AQYPYQTPVL GRSRSGWDAT MGAYSNVTPE
DGGVTILSKW PILEKIQYVY ADGCGADWFS NKGFVYARLD VNGAPLHVVG THAQAADTGC
ADGTGAGVRA AQFDELRAFL DARLIPTGEQ VIITGDLNVD RYSAEYAGML TRLDVSDTSF
TGHPYSWDSA RNAMADYNDD RNSRQQLDYV MQRNGHARHG SGDNQTLAVN APKWCVTSWF
VRYCYTDYAD HYPVAANV
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