Gene Sare_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1959 
Symbol 
ID5703608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2252621 
End bp2254006 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content66% 
IMG OID641271464 
ProductXRE family transcriptional regulator 
Protein accessionYP_001536835 
Protein GI159037582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.24175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAAG CCCCGCGGGC GCTCCAGCCA TCCCTGTCCG AGCGCAACTT CTTCGGCGCG 
GAACTGCGCC GGCTGCGCGA ACGCGCGAAC CTCTCGCAGG CGCGGCTGGG CACCATGATC
CGTTTCAGCG CGGACCTGGT TCGTCGCGTG GAAACGGCCG ACCGGTTCCC CTCCCGTGAG
TTCGCCGAGG CCTGCGACAA GGCACTGGCG ACCGGGGGCG CACTGATGCG CCTGCTGCCG
CTGCTCGACA AGAACCGGGC CAGCGACAGC AGGCCGGCCA ACACCTCGCC AGCCGGCGTC
GGCCTCAGCA GCGTTCTATC TGATCGCCTG GCCGAAACGT CGAGGTTGGC CGAGATGGTT
GCTCGGGTTC CGTTCCAACC CGGTGTCCTC GATCGCGCCG CCCTTGACTG GATAAACGCT
GCGGCGGGAC CCCGACTGTC CGTGGCCGGA CGACCCGGCT CGCCTGACCA AGTTGACGAA
GGAGATCTTC ATTCGGTGGA GACCGCTCTG GCGATGTACC GGCAGCTGGA CCACACCCAC
GGCGCCGGAC GAGTGCACGC CCAAGTGCAG CGCTACGTCG AAGGTGAACT GAACCGGCTG
CTGGCGAACA GCCCCGTCTC CGAGACGGCG GGGCGGCGGC TCTACAGGCT TGCGGCAGGT
TTCTTCGAAC TGTGTGGATA CCAAGCGGTC GACAGCGGTG CCCATGGCCT TGCCCAGCGC
CGCTATCTTC GCGCTCTGCG TCTGACGGAA GCTGCCAATG ACCGCTTGTA CGGAAGCTAC
TTACTCGCCG TGAATATTGG GCACCTAGCG CTGCACTGCG GGCATCCCGA GCCGGCGCAC
AGGGTGGCGA TGACGGCGGT GAGAGGAAGC GAAGCCCAAG TGACACCCGC TGTGGCAGCA
GCGCTGCATG CGGTGGTGGC GCGTACGCAC GCCCGTCTTG GTCGCGAAGG CGATTGCCTT
ACCCACCTCG ACATTGCTGA AAGGCAGTTA GCCCTAAGTA CGGTCGAGGA CGAGCCCGTG
TGGATTCGGT ACTTCAACGC GGCGTATCTC GCCGACGAGA TGGCGCACTG CTTCCATGAC
CTGGGTCAAC CGCGGCAAAC CCAACGGCAC CTGGGCGATG CCCTTACCGT CCTGAGCCCC
ACACATGTCC GGCGACTCGC CATCGACACC GCGCTCATGG CCTCATCGTG GGCCGTGTCC
GGCCGCATCG ATGAAGCCTG CGCCACCGCA CGACAGGCAG TCGACTATGC CGCACAAACC
ACCTCACATC GCTGCCTGCA GCGCATCGTC GAGGTGCAGG TTGACCTCGA GCCCTATCGG
TGTGAGCCGG AAGTCCGCGA ACTCGGCGAG TATGTTCGTC ACCGGCTACC GTTGGCAGCG
GTGTAG
 
Protein sequence
MGQAPRALQP SLSERNFFGA ELRRLRERAN LSQARLGTMI RFSADLVRRV ETADRFPSRE 
FAEACDKALA TGGALMRLLP LLDKNRASDS RPANTSPAGV GLSSVLSDRL AETSRLAEMV
ARVPFQPGVL DRAALDWINA AAGPRLSVAG RPGSPDQVDE GDLHSVETAL AMYRQLDHTH
GAGRVHAQVQ RYVEGELNRL LANSPVSETA GRRLYRLAAG FFELCGYQAV DSGAHGLAQR
RYLRALRLTE AANDRLYGSY LLAVNIGHLA LHCGHPEPAH RVAMTAVRGS EAQVTPAVAA
ALHAVVARTH ARLGREGDCL THLDIAERQL ALSTVEDEPV WIRYFNAAYL ADEMAHCFHD
LGQPRQTQRH LGDALTVLSP THVRRLAIDT ALMASSWAVS GRIDEACATA RQAVDYAAQT
TSHRCLQRIV EVQVDLEPYR CEPEVRELGE YVRHRLPLAA V