Gene Sare_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1936 
Symbol 
ID5704783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2231917 
End bp2232534 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID641271441 
Productisochorismatase hydrolase 
Protein accessionYP_001536812 
Protein GI159037559 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG GTCGCCCTGT GCTCGTCGTG ACCGACATGC AGAACGGCTT TGTCCGCGAG 
CAATCAGCAT ACATCGTACC TGTCGTTGCC GATTTGGTGC GCCGCTGGCA GGGGGTCGGT
GGCGACACGC TTTTTACCCG GTATCTAAAC TATCCAGGCA GCCCCTTTGA GCGATTCTTT
GACTGGCGGC GACTTCAGTC GTCGCCCGAT ATTGACTTGG TGCCTGAGCT GCACCCGTAT
TTGGGTAAGG GTGTAGTGCT TGACAAGAGA ATCTATAGCC CGTTTACCTC GGAGGGTGTG
GCGCTATTTA AGCGGCATGG ATGGAAAGAA TTCTACTTCT GTGGTATTGC TACGGAGAGC
TGCGTCCTGA AGGGTGCTGT AGATGCATTT GAGCATGACT TCACGCCGTG GTTGATCGCG
GACGCATCGG CGAGCCATGC GGGCGCTGAG GCACACGAGG CGGGACTACT GGTCGCGCGA
CGTTTCATCG GTCCCGGTCA AGTAATTCGG TTGGCTGACA TCCCCGCAGC CCTCATTGAC
ATGCCGCCGT CGTTGCAAGC ACGTGTTGAA CGTCCTGCTC ACGACTCTGC GAATGGGAAA
CAGATCACCC CTACCTAA
 
Protein sequence
MSSGRPVLVV TDMQNGFVRE QSAYIVPVVA DLVRRWQGVG GDTLFTRYLN YPGSPFERFF 
DWRRLQSSPD IDLVPELHPY LGKGVVLDKR IYSPFTSEGV ALFKRHGWKE FYFCGIATES
CVLKGAVDAF EHDFTPWLIA DASASHAGAE AHEAGLLVAR RFIGPGQVIR LADIPAALID
MPPSLQARVE RPAHDSANGK QITPT