Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1936 |
Symbol | |
ID | 5704783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2231917 |
End bp | 2232534 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641271441 |
Product | isochorismatase hydrolase |
Protein accession | YP_001536812 |
Protein GI | 159037559 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0127219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCTG GTCGCCCTGT GCTCGTCGTG ACCGACATGC AGAACGGCTT TGTCCGCGAG CAATCAGCAT ACATCGTACC TGTCGTTGCC GATTTGGTGC GCCGCTGGCA GGGGGTCGGT GGCGACACGC TTTTTACCCG GTATCTAAAC TATCCAGGCA GCCCCTTTGA GCGATTCTTT GACTGGCGGC GACTTCAGTC GTCGCCCGAT ATTGACTTGG TGCCTGAGCT GCACCCGTAT TTGGGTAAGG GTGTAGTGCT TGACAAGAGA ATCTATAGCC CGTTTACCTC GGAGGGTGTG GCGCTATTTA AGCGGCATGG ATGGAAAGAA TTCTACTTCT GTGGTATTGC TACGGAGAGC TGCGTCCTGA AGGGTGCTGT AGATGCATTT GAGCATGACT TCACGCCGTG GTTGATCGCG GACGCATCGG CGAGCCATGC GGGCGCTGAG GCACACGAGG CGGGACTACT GGTCGCGCGA CGTTTCATCG GTCCCGGTCA AGTAATTCGG TTGGCTGACA TCCCCGCAGC CCTCATTGAC ATGCCGCCGT CGTTGCAAGC ACGTGTTGAA CGTCCTGCTC ACGACTCTGC GAATGGGAAA CAGATCACCC CTACCTAA
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Protein sequence | MSSGRPVLVV TDMQNGFVRE QSAYIVPVVA DLVRRWQGVG GDTLFTRYLN YPGSPFERFF DWRRLQSSPD IDLVPELHPY LGKGVVLDKR IYSPFTSEGV ALFKRHGWKE FYFCGIATES CVLKGAVDAF EHDFTPWLIA DASASHAGAE AHEAGLLVAR RFIGPGQVIR LADIPAALID MPPSLQARVE RPAHDSANGK QITPT
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