| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1822 |
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| Symbol | |
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| ID | 5706468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2099909 |
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| End bp | 2100736 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641271324 |
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| Product | shikimate-5-dehydrogenase |
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| Protein accession | YP_001536699 |
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| Protein GI | 159037446 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000319843 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCATCTG AGCGGGTGCG GGCGGCGGTG GTCGGCGCGC CGGTCGCGCA TTCCCTTTCC
CCGCTGATCC ACAATGCCGG CTACGCCGCG GTCGGCCTCG ACCAGTGGTC GTACACCCGC
TTCGAATGCG CGGAGGCCGA CCTGCCAGCC CTGGTCGCTG GCCTGGGCCC GGAGTGGGCG
GGGCTCTCGG TGACCATGCC GGGCAAGGAG GCGGCGCTCG CGGTGGCCGC GACAGCGTCG
CCGGTCGCGG TCGCCGTCGG CGCGGCCAAC ACTCTGGTAC ACCAGCACGA CGGCTCCTGG
CGCGCGGACA ATACCGATGT CGGTGGCATG GTGGAGGTGC TGACCTCGGC CGGCGTACGC
CCGGAGTCGA CGCTGACGGT GCTCGGCGCT GGCGGCACCG CCCGGGCGGC GGTGGCTGCG
GCGGCGGCGC TACGCGCCCG GACGGTGACT GTGGTGGCCC GGCGAAAGGC CGCTATCGAC
GATCTGCGTC CGGTGGCGGA GGCGGTCGGT GTGTCGCTGG TTGGCGTCCC GTGGGCTGAC
GCTGCCGCGG CCTGCCGCGC CGACGTGGTG ATCTCGACTG TGCCGAAGGG GGCCGCCGAC
CGGCTCGCCA GGGCGGTGGC GTGGCGGCCC GCCACGGTGC TCTTCGATGC TCTCTACGAC
CCGTGGCCGA CCCCGCTGGC GTCCGTCGCA CAGGCGGCCG GCTGCCGGGT CTGTTCTGGT
CTCGATCTGC TGCTGGCCCA GGCGGTCGGC CAGTTCGAGC AGTTCACGGG GGTGCCGGCG
CCGCGCGAGG CGATGGCTGC CGCGCTCACC TCGGCGCGGG CCGGCTGA
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| Protein sequence | MSSERVRAAV VGAPVAHSLS PLIHNAGYAA VGLDQWSYTR FECAEADLPA LVAGLGPEWA
GLSVTMPGKE AALAVAATAS PVAVAVGAAN TLVHQHDGSW RADNTDVGGM VEVLTSAGVR
PESTLTVLGA GGTARAAVAA AAALRARTVT VVARRKAAID DLRPVAEAVG VSLVGVPWAD
AAAACRADVV ISTVPKGAAD RLARAVAWRP ATVLFDALYD PWPTPLASVA QAAGCRVCSG
LDLLLAQAVG QFEQFTGVPA PREAMAAALT SARAG
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