| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1821 |
|---|
| Symbol | |
|---|
| ID | 5706467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2098714 |
|---|
| End bp | 2099919 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641271323 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_001536698 |
|---|
| Protein GI | 159037445 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000914518 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG ATCTGGACCC CGAGTTCGAT GCGGACCGGG GAGAGAAGGG CCGGCATCGG
CGCCGCTACG TGCGCAGGCG CCAGCGTCAG CGCCGGAGCG GTTCGGGTGG TGGGCGTGGC
AAGACCGCCC TGGCTCTGTT GCTCACCCTG GTTTTGCTCG GCGGCCTCGG CGGTGGTGCC
TTCTACGGCT TCGAACGGAT CCAGAACTTC CTCGGCACGC CGGATTACGA CGGTTCTGGC
ACCGAGGCGG TGACGGTCGA GATCATGGAA GGGGCATTGA TCGCCGACAT GGCGGTCACG
CTCTACGAGG CCGGGGTCGT CAAGAGTACC AAGGCTTTCA TCGAGGCCGC GGAGGATGAC
GGCCGCAGCA AGACCATCCA GCCAGGCCAG TACCAGTTGC GCAGGCAGAT GAGTGGCGCC
AGCGCCGTGG CCGCGCTGCT GGACCTGACG AACCGGGTCG TCAACGGGAT CACCATTCCC
GAGGGGCGCA CCGCGAAGAG CGTCTACAAG CTCCTCTCCG AGAAGACCAA CGTCCCGGTC
ACGGAGTTCG AGGCGGCGGC GAAGGACCCG ATCGCGCTCG GTGTCCCGGA ATGGTGGTTC
ACGCGCACGG ACGACCGGAA GGTCGAGCCG TCGATCGAGG GATTCCTCTT CCCCGACACC
TACGAGTTTC CCCCGAAGTC AACGGCTGAG TCGATCCTTG GGCTGATGGT GGAGCGGTTC
CTCACCGTCG CCGAGGAGCT GCGGTTCGTC GACCGGGTGC AGAACGAACG GCAGATCGCG
CCGTACGAGG CGCTGATCGT CGCGTCGCTC GCCCAAGCTG AGGCGGGTGT TCCGGGGGAT
CTCGGCAAGG TCGCCCGGGT CGCCTACAAC CGGGTCTACG GCGACTTCCC GTGCAACTGC
CTGGAGATGG ACGTCACGAT CAACTACCAC CTGGAGTTGA CCGGCCAGAA GACCAAGACC
TCGGCCGAGA TGACGGAGGA CGAGCTGCTC GACACAAAGA GCCCGTACAG CCGCAAGCTT
CGGGGTCTGA TTCCCACACC GATCAACAAT CCGGGTCAGT TGGCCCTGGA GGGCGCCATG
GACCCGCCGC CGGGTAAGTG GCTGTACTTC GTTGCGATCA ACAAGGAGGG ACAGTCCGCC
TTCGCGGAGA CCTACGAGGA GCAGCTGCGC AACGAGGCAA AGGCGAGGGA GGCGGGTGTC
ATCTGA
|
|---|
| Protein sequence | MIDDLDPEFD ADRGEKGRHR RRYVRRRQRQ RRSGSGGGRG KTALALLLTL VLLGGLGGGA
FYGFERIQNF LGTPDYDGSG TEAVTVEIME GALIADMAVT LYEAGVVKST KAFIEAAEDD
GRSKTIQPGQ YQLRRQMSGA SAVAALLDLT NRVVNGITIP EGRTAKSVYK LLSEKTNVPV
TEFEAAAKDP IALGVPEWWF TRTDDRKVEP SIEGFLFPDT YEFPPKSTAE SILGLMVERF
LTVAEELRFV DRVQNERQIA PYEALIVASL AQAEAGVPGD LGKVARVAYN RVYGDFPCNC
LEMDVTINYH LELTGQKTKT SAEMTEDELL DTKSPYSRKL RGLIPTPINN PGQLALEGAM
DPPPGKWLYF VAINKEGQSA FAETYEEQLR NEAKAREAGV I
|
|---|
| |