Gene Sare_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1785 
Symbol 
ID5706596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2059545 
End bp2060588 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content73% 
IMG OID641271288 
Productaminotransferase class V 
Protein accessionYP_001536663 
Protein GI159037410 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00235645 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGATTA CGCAGGCACA GCAGCTGTGG CAGCCGCACC GGGGCTGGCT GAATACCGCC 
ACCTACGGAC TGCCGCCCGA CCCGGCATGG GCGGCGTTGC AGGAGGCGCT CGCCGCCTGG
CGCATGGGGA GCATGGGTAC GTCGTGGGAG AGCTGGGACG AGGCCACGGT ACGGACCCGT
GCCGCGTTCG CGCGGCTGGT CGGCGTCGAC GCCGGGGACG TCACGGTCGG CAGCTCGGCG
TCGCAGTTGT TCGCGCCGGT GGCCGCCGCG CTGCCGGCGG GCGCGACCGT GGTGGTTCCC
GAGGTCGAGT TCACCTCCAA CCTCTTTCCC TGGCTGGCCC AGGAGCAGCG GGGCGTTCGG
GTGCGTACCG TGCCGCTGGC GGACCTGGTC GACGCGATCG ACGCCGACAC GGATCTGGTC
GCGTTCAGCC TGGTGCAGTC GTCCGACGGC ACGGTGGCCC GATACGCGGA GGTCGTCGCC
GCGGCCAGGG CACACGGCGC CCTGGTGGCG GTTGACGCCA CGCAGGCGTG CGGTTGGCTT
CCGTTCGACG GCGCGCTCGC GGACGTGGTC GTCGTCGCCG CGTACAAGTG GTTGCTGGCG
CCGCGGGGCA CGGCGCTGGC GTACTACGCC CCCGAGCTGC GGGACCGGAT GCGCCCCGAC
ACCGCCTGCT GGTATGCCGG GGCCGACCCG CACGACTCCT ACTACGGCCC GCCGCTGCGG
CTGGCCGACA ACGCCCGGCG CTTCGACATC TCCCCGGCCT GGTTCAGCTA CGTCGGGGCC
GCTCCCGCCC TGGAACTGTT ACTGGAGGTG GGGGTCCCGG CGATCCACGC GCACAACGTG
GCGCTGGCCA ACCGGTTCCG TTCCGGCCTG GGGCTGCCAT CCGGTGACAG CGCGATCGCT
GTCGCCCAGG TGCCGGAAGC GCAGTCGAGG CTGGAGCGCG CTGGCGTGCG GGCGGCGGTG
CGCGCCGGTC GGGTCCGGGT CTCGTTCCAC GTCTACTGCA CCGAGGACGA CGTCGACCGG
GCGCTCGACG CGCTGACCGG CTGA
 
Protein sequence
MEITQAQQLW QPHRGWLNTA TYGLPPDPAW AALQEALAAW RMGSMGTSWE SWDEATVRTR 
AAFARLVGVD AGDVTVGSSA SQLFAPVAAA LPAGATVVVP EVEFTSNLFP WLAQEQRGVR
VRTVPLADLV DAIDADTDLV AFSLVQSSDG TVARYAEVVA AARAHGALVA VDATQACGWL
PFDGALADVV VVAAYKWLLA PRGTALAYYA PELRDRMRPD TACWYAGADP HDSYYGPPLR
LADNARRFDI SPAWFSYVGA APALELLLEV GVPAIHAHNV ALANRFRSGL GLPSGDSAIA
VAQVPEAQSR LERAGVRAAV RAGRVRVSFH VYCTEDDVDR ALDALTG