| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1784 |
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| Symbol | dnaE |
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| ID | 5706595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2055942 |
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| End bp | 2059475 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641271287 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001536662 |
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| Protein GI | 159037409 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00195815 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGATT CGTTCGCGCA TCTGCACGTG CACACGGAGT ACTCGATGCT CGACGGTGCG
GCCCGGCTGA AGGACCTGTT CGCCGAGGTC AACCGCCAGG GGATGCCGGC CGTGGCAATG
ACCGACCACG GAAACATGCA CGGCGCGAAC GACTTCTACA AGCAGGCGAT GGCGGCCGGC
GTCACACCGA TCCTGGGGAT CGAGGCGTAC GTCGCACCGG AGTCGCGGTT CCACAAGCAG
CGGGTGCGGT GGGGCCGGCC GGAGCAGAAG AGCGACGACG TCTCCGGCAG CGGTGGTTAC
ACCCACATGA CCATCTGGGC GCGTAACAAG GTGGGGTTGC ACAACCTGTT CAAGCTGACC
AGTCGGTCGT TCACCGAGGG GTTCTTCGTC AAGTGGCCGC GGATGGACGC GGAGTTGCTC
GCTGAGCACG CCGACGGGTT GATGGCCACG ACCGGCTGCC CCTCCGGCGA GGTGCAGACC
CGGTTACGGC TGGAACAGTA TGACGAGGCC CTGAAGGCTG CCGCGAGATA CCAGGACATC
TTCGGCAAGG AGAACTTCTT CCTGGAGGTC ATGGACCACG GCATCGACAT CGAGCGTCGG
GTTCGCCAGG AGCTGGCGGA GATCTCGCAC AAGCTGGATA TTCCGCCCGT TGTCACCAAC
GACACGCACT ACACCCACCA GGAGCAGTCC GAGGCGCACG ATGTGCTGCT CTGCGTGCAG
ACCGCGGCGA ACGTCAGCGA CCCCAACCGG TTCCGGTTCG ACGGCAGCGG CTACTACATC
AAGTCCGCCG ACGAGATGCG CGCCATCGAC TCGTCCGACC TGTGGCTTCA GGGCTGCCGC
AACACGCTGC TGGTCGCGGA GAAGGTCGAC CCGACCGGCA TGTTCGACTT CCGGAACCTG
ATGCCGCGCT TCCCGGTGCC GGAGGGGGAG ACCGACGAGT CCTGGTTCCG CAAGGAGACG
TTCAAAGGGC TCGCCCGCCG CTTCCCCGAC GGCGTCCCGG AGACCCACGT CAAGCAGGCC
GAGTACGAAC TGGGTGTCAT CATCCAGATG GGTTTCCCGT CGTACTTCCT CGTGGTCGCC
GACTTCATCC AGTGGGCCAA GGGCGAGGGC ATCGCCGTGG GGCCCGGCCG TGGTTCGGCC
GCCGGTTCCC TGGTCGCGTA CGCCCTGGGC ATCACCGACC TGGATCCGTT GCCGCACGGG
CTGATCTTCG AGCGATTCCT CAATCCCGAG CGGGTCTCGA TGCCGGATGT CGACATCGAC
TTCGACGAGC GTCGGCGCGG CGAGGTGATC AAGTACGTCA CGGAGAAGTG GGGTGAGGAC
AAGGTCGCGC AGATCGCGAC CTTCGGCACG ATCAAGGCGA AGGCCGCGAT CAAGGACTCG
GCGCGGGTGC TCGGCTACCC GTACGCGGTC GGTGACCGGA TCACCAAGGC GATGCCACCG
GCCGTGATGG GCAAGGACAT CCCGCTGACC GGCATCTTCG ACCCGAAGCA CTCCCGGTAC
GCGGAGGCCG GCGAGATCCG CGGTCTCTAC GAGTCCGACC CGGACGTCAA GAAGGTCATC
GACACCGCGC GTGGCATCGA GGGTCTGATC CGGCAGACGG GTGTGCACGC CGCCGGGGTC
ATCATGTCCG CCGAGCCGAT CATCGACCAC ATCCCGCTGA TGCGCCGGGA CGCCGACGGG
GCGATCATCA CGCAGTTCGA CTACCCGACC TGTGAGTCGC TCGGGCTGCT GAAGATGGAC
TTCCTCGGCC TGCGCAACCT GACCATCATC GACGACGCGC TGAAGAACAT CGAGAGCAAC
CACGGGCGTA CGGTCGACCT GCTCAAACTG CCGTTGGACG ACACGCCGAC CTACGAGCTG
CTGTCCCGTG GCGACACCCT GGGCGTGTTC CAGCTCGACG GCGGGCCGAT GCGGTCGCTG
CTGCGAACGA TGAAGCCGGA CAACTTCGAG GACATCTCCG CGGTCCTGGC GCTGTACCGG
CCGGGCCCGA TGGGCGCCAA CTCGCACACC AACTACGCGT TGCGCAAGAA CGGCCTCCAG
GAGATCACCC CGATCCACCC GGAGCTGGCC GAACCGCTGG AGGAGATCCT TGGGCCCACC
TACGGCCTGA TCGTCTACCA GGAGCAGGTG CAGCGTGCGG CCCAGGTCCT CGCCGGCTAC
AGCCTCGGCA AGGCCGACCT GCTGCGGCGG GCGATGGGCA AGAAGAAAAA AGAGGTGCTC
GACAAGGAGT TCGTGCCGTT CCGCGACGGA ATGCGCGGCA ACGGCTACTC CGACGAGGCC
ATCCAGACGC TGTGGGACAT CCTCGTCCCC TTCGCCGACT ACGCGTTCAA CAAGGCCCAC
ACCGCCGGGT ACGGCCTGGT GTCGTACTGG ACCGGCTACC TGAAGGCGAA CTACCCGGCC
GAGTACATGG CGGCACTGCT CACCTCCGTG GGCGATGACA AGGACAAGAT GGCGCTCTAT
CTGTCGGAGT GCCGCCGGAT GGGCATCCAG GTTCTCCCGC CGGACGTGAA CACCTCGGCC
GGGCCGTTCA CTCCGGTCGG CCGGGACATT CGCTTCGGCC TGGCCGCGAT CCGTAACGTC
GGTGCGAACG TGGTCAGCGC GATCATGCGC TGCCGCGGGG AGAAGAGCGC CTACACCGAC
TTCTACGACT TCCTGTCCAA GGTGGATGCG GTCGTCTGCA ACAAGAAGAC CATCGAATCT
CTGATCAAGG CGGGCGCGTT CGACTCACTC GACCATCCCC GCCGGGGCCT GCTCGCGGTG
CACGCCGACG CCATCGACGC GTACGCCGAC GTCAAGCGCA AGGAGGCCGT CGGCCAGTAC
GACCTGTTCG GCGCCGGGTT CGCCGACCCG GAGGTCGGCA CCAGCACCAC GGTGATGCCG
GCCATCGTCG ACGGGGAGTG GGACAAGCGG GAGAAGCTTG CCTTCGAGCG CGAGATGCTC
GGCCTCTACG TCTCCGACCA TCCGCTGTTC GGCCTGGAGC ATGTGCTCGG CAAGGAAGCC
GACACCACCA TCGCCGCCCT CTCGGAGGAG GGGACCATCC CCGACGGGAC GGTGGTGACA
CTCGCGGGCA TCCTCTCCGG GGTGCAGCGC CGGGTCACCA AGCAGGGCCG GGCGTGGGCG
TCGGCGACGC TGGAGGACCT GGCCGGCGGG GTGGAGACGC TGTTCTTCCC CAACACCTAC
GAGGTGATCG GGCAGTACAT CGCCGAGGAC GCGATCGTGG TGGTCAAGGG GCGGGTCGAC
CGCCGTGACG ACACACCGCG GATCATGGCG ATGGACATGT CGATCCCGGA TGTCAGCAGC
AACTCGGCCA ACAAGCCGGT CACCCTCACC ATTCCGGTCA CCCGGTGCAC GCCGCCGCTG
GTGGAGCGGC TCAAGGAGAC GCTGGTGCTG CATCCCGGCG ACGCGGAGGT GCACGTCAAG
CTCCTCAACG GCAGCAAGGT GACCCGGCTG CGACTCGGTC CGTTCCGGGT GGCGGCCACC
ACCGCCCTGA TGGCCGACCT GAAGAGTGTC CTCGGCCCGG CCAACGTGGG CTGA
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| Protein sequence | MGDSFAHLHV HTEYSMLDGA ARLKDLFAEV NRQGMPAVAM TDHGNMHGAN DFYKQAMAAG
VTPILGIEAY VAPESRFHKQ RVRWGRPEQK SDDVSGSGGY THMTIWARNK VGLHNLFKLT
SRSFTEGFFV KWPRMDAELL AEHADGLMAT TGCPSGEVQT RLRLEQYDEA LKAAARYQDI
FGKENFFLEV MDHGIDIERR VRQELAEISH KLDIPPVVTN DTHYTHQEQS EAHDVLLCVQ
TAANVSDPNR FRFDGSGYYI KSADEMRAID SSDLWLQGCR NTLLVAEKVD PTGMFDFRNL
MPRFPVPEGE TDESWFRKET FKGLARRFPD GVPETHVKQA EYELGVIIQM GFPSYFLVVA
DFIQWAKGEG IAVGPGRGSA AGSLVAYALG ITDLDPLPHG LIFERFLNPE RVSMPDVDID
FDERRRGEVI KYVTEKWGED KVAQIATFGT IKAKAAIKDS ARVLGYPYAV GDRITKAMPP
AVMGKDIPLT GIFDPKHSRY AEAGEIRGLY ESDPDVKKVI DTARGIEGLI RQTGVHAAGV
IMSAEPIIDH IPLMRRDADG AIITQFDYPT CESLGLLKMD FLGLRNLTII DDALKNIESN
HGRTVDLLKL PLDDTPTYEL LSRGDTLGVF QLDGGPMRSL LRTMKPDNFE DISAVLALYR
PGPMGANSHT NYALRKNGLQ EITPIHPELA EPLEEILGPT YGLIVYQEQV QRAAQVLAGY
SLGKADLLRR AMGKKKKEVL DKEFVPFRDG MRGNGYSDEA IQTLWDILVP FADYAFNKAH
TAGYGLVSYW TGYLKANYPA EYMAALLTSV GDDKDKMALY LSECRRMGIQ VLPPDVNTSA
GPFTPVGRDI RFGLAAIRNV GANVVSAIMR CRGEKSAYTD FYDFLSKVDA VVCNKKTIES
LIKAGAFDSL DHPRRGLLAV HADAIDAYAD VKRKEAVGQY DLFGAGFADP EVGTSTTVMP
AIVDGEWDKR EKLAFEREML GLYVSDHPLF GLEHVLGKEA DTTIAALSEE GTIPDGTVVT
LAGILSGVQR RVTKQGRAWA SATLEDLAGG VETLFFPNTY EVIGQYIAED AIVVVKGRVD
RRDDTPRIMA MDMSIPDVSS NSANKPVTLT IPVTRCTPPL VERLKETLVL HPGDAEVHVK
LLNGSKVTRL RLGPFRVAAT TALMADLKSV LGPANVG
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