| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1689 |
|---|
| Symbol | |
|---|
| ID | 5705224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1949413 |
|---|
| End bp | 1951035 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271192 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001536567 |
|---|
| Protein GI | 159037314 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.224017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00115774 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTCA ACGGCGATGT TCAGGTCGCG GGCACCCGGG GGCGGATCGT CATGCTCGTC
GACAATGGGG TGGCCGGAGA CTCCCGGGTG CAAAAGGCCG CCCGGTCCGC CGCTCGGTCC
GGCTGGGACG TGACACTACT CGGTCGGGCA CCGGGAAACG ATCCACGATC CTGGCAGCTC
GGCCCTGCCG AGGTGCGGCT GCTCGCCATG CCGGACCCGC TGGCCCGCCG TCGGCACGAG
TTTCGCAGGG CCTGGTTGCG CTGGCCACTG GCCTACCCGC CCAGCGGGAT CGCGGCGCAC
CGACGACAGG CGGTGAAGGC GTGGCAAGCG GACTTGGCCG TGCGCCGGGC GCAGCTCGCG
GTGGCGGACC CAGCAACGCC CCGGCTCGGC CTGCGTTCGC GCGCACTACA CGCCGAGGAA
CTCGCCGCCC GGGTAGCGGG GACGTGGGTC TCGGCGCGGT ACTGGATGCT CACCCGGGCC
CGTACGCGGC GCCGGTTCCG CAACCCCTGG GATCGGGCCT ACACCCTGTT CTGGCAGGCG
GTCAAGGGCG ATGGCGCCTG GCGTAGGCTC GAGCCGAGTC TGTGGGACTA CGAGCTGGCC
TACGGCCCGG TGCTCGACGC GTTGCAGCCG GACCTGATTC ACGCGAACGA CTTTCGGATG
CTCGGCGTTG GTGCTCGCGC CAAGATCCGT GCCGCCGCCC GGGGGCGTGA GATCAAACTC
GTGTGGGACG CGCACGAGTT CCTGCCGGGG GTTCGGCCCT GGCGGGACGA CGCCCGATGG
CTGCCCGCGC ACCGTGCGCA CGAGCGGGAG TACGCGCCGT ACGCGGATGC GGTGGTGACG
GTATCGCCGG CGTTGGCGGA GCTGCTTCGC GACGAGCACA AGCTGGCTGG GACGCCGGCG
GTGGTGCTCA ATGCGCCGGA CATCGGGACC GTCCCGCCGG CCGACGAGGA GGCGGCACCG
GATCTCCGGG CCCGCTGCGG CGTCGACCCG GACACCCCCC TGCTCGTCTA CAGTGGCCTC
GCATCGCCGC AGCGCGGCCT GGACATCATG GTCGAGGCGT TGCCGCGCCT GCCCGGTGTG
CACGCGGCAC TGGTCGTCAA TAAGCCGGAC GGCCCGCATG CAGCCGAGGT ACGGGCACGG
GCCGCCCGAC TCGGTGTCGC CGACCGCGTG CACGTCCTGC CGTACGTGGC GCACTGGCAG
GTGGTGCCGT TCCTGGCTGG TGCGGACGCC GGGATCATCC CCATCCACCA CTGGCCCAAC
CATGAGATCG CGCTGATCAC CAAGTTTTTC GAGTATTCGC ACGCGCGGTT GCCGTTGGTG
GTCAGCGACG TGAAGACGAT GGCCGACACG GTCCGTTCTA CCGGCCAGGG TGAGGTGTTC
CGGGCTGAGG ACGTGGCCGA CTACGTCCGC GCCGTTAGCG CGGTGCTGGC CGAACCGGAT
CGTTACCGGG CCGCGTACGA CCGGCCGGGC CTGCTGGAGA GCTGGACCTG GGAGGCGCAG
GCCGAGGTGC TGGACGCCGT CTACCGCCGG CTGTTGTCCG GGAGTGCGTC CGCGACGGGC
CGAGCCGGCG AGCCGGTGGC GGCGCCGGAA GGCCCGCTGC CCGCAGTCGA GGTCGTCCCA
TGA
|
|---|
| Protein sequence | MGFNGDVQVA GTRGRIVMLV DNGVAGDSRV QKAARSAARS GWDVTLLGRA PGNDPRSWQL
GPAEVRLLAM PDPLARRRHE FRRAWLRWPL AYPPSGIAAH RRQAVKAWQA DLAVRRAQLA
VADPATPRLG LRSRALHAEE LAARVAGTWV SARYWMLTRA RTRRRFRNPW DRAYTLFWQA
VKGDGAWRRL EPSLWDYELA YGPVLDALQP DLIHANDFRM LGVGARAKIR AAARGREIKL
VWDAHEFLPG VRPWRDDARW LPAHRAHERE YAPYADAVVT VSPALAELLR DEHKLAGTPA
VVLNAPDIGT VPPADEEAAP DLRARCGVDP DTPLLVYSGL ASPQRGLDIM VEALPRLPGV
HAALVVNKPD GPHAAEVRAR AARLGVADRV HVLPYVAHWQ VVPFLAGADA GIIPIHHWPN
HEIALITKFF EYSHARLPLV VSDVKTMADT VRSTGQGEVF RAEDVADYVR AVSAVLAEPD
RYRAAYDRPG LLESWTWEAQ AEVLDAVYRR LLSGSASATG RAGEPVAAPE GPLPAVEVVP
|
|---|
| |