Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1666 |
Symbol | |
ID | 5703436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1918135 |
End bp | 1918833 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271170 |
Product | cation efflux protein |
Protein accession | YP_001536545 |
Protein GI | 159037292 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.56909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACGT CCACGCTGAC GCCCGAGCGG CGTACGCTCC TGTCCCGACG CAGCCTGTGG CTGGCCTACG CCACCGCCGG GTACAACCTC CTGGAAGGCC TGGTCGCGAT CGCCGCCGGG GCCGCGGCCT CCTCCACGGC ACTGATCGGC TTCGGCCTCG ACTCGTTCGT CGAGGTGTCC AGCGCGGCCG TCGTGATCTG GCAGTTCCGC TCCCGGGTGC CGGAGGAACG GGAACGGTTG GCGCTACGAC TGATCGGTGT CTCGTTCTTC GCCCTGGCCG CCTGGATCAC CGTGGACGCC GGACGTTCGC TGCTCGGTGG CGGAGAAGCG AGCCCCAGTC CCGTCGGGAT CGGCCTCGCC GTCGCATCGC TGATCGTCAT GCCACTCCTG GTGCGCGCCA AACGACGCAC CGGCCGGGAG CTCGGCTCGG CCACCGTCAT GGCCGACTCC ACACAGACCG CACTCTGCAC GTACCTGTCC GCGGTACTTC TCGTCGGCCT GCTGCTCAAC GCCTGGCTCG GCTGGTCCTG GGCGGATCCG ATCGCCGCGC TCGCCATCGC CGCCGTCGCG GTCCGGGAAG GGGTCTCGGC GTGGCGGGGT GATCAGTGCG ATGACTGCGC CCCACCCAAC CTCGCCTCCC CCACCCCCGA GGCGGCGCCG AGTTGCGCCG ACGGATGCCG TCCCGACCGT GCCGGCTAG
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Protein sequence | MNTSTLTPER RTLLSRRSLW LAYATAGYNL LEGLVAIAAG AAASSTALIG FGLDSFVEVS SAAVVIWQFR SRVPEERERL ALRLIGVSFF ALAAWITVDA GRSLLGGGEA SPSPVGIGLA VASLIVMPLL VRAKRRTGRE LGSATVMADS TQTALCTYLS AVLLVGLLLN AWLGWSWADP IAALAIAAVA VREGVSAWRG DQCDDCAPPN LASPTPEAAP SCADGCRPDR AG
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