Gene Sare_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1666 
Symbol 
ID5703436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1918135 
End bp1918833 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID641271170 
Productcation efflux protein 
Protein accessionYP_001536545 
Protein GI159037292 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.56909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACGT CCACGCTGAC GCCCGAGCGG CGTACGCTCC TGTCCCGACG CAGCCTGTGG 
CTGGCCTACG CCACCGCCGG GTACAACCTC CTGGAAGGCC TGGTCGCGAT CGCCGCCGGG
GCCGCGGCCT CCTCCACGGC ACTGATCGGC TTCGGCCTCG ACTCGTTCGT CGAGGTGTCC
AGCGCGGCCG TCGTGATCTG GCAGTTCCGC TCCCGGGTGC CGGAGGAACG GGAACGGTTG
GCGCTACGAC TGATCGGTGT CTCGTTCTTC GCCCTGGCCG CCTGGATCAC CGTGGACGCC
GGACGTTCGC TGCTCGGTGG CGGAGAAGCG AGCCCCAGTC CCGTCGGGAT CGGCCTCGCC
GTCGCATCGC TGATCGTCAT GCCACTCCTG GTGCGCGCCA AACGACGCAC CGGCCGGGAG
CTCGGCTCGG CCACCGTCAT GGCCGACTCC ACACAGACCG CACTCTGCAC GTACCTGTCC
GCGGTACTTC TCGTCGGCCT GCTGCTCAAC GCCTGGCTCG GCTGGTCCTG GGCGGATCCG
ATCGCCGCGC TCGCCATCGC CGCCGTCGCG GTCCGGGAAG GGGTCTCGGC GTGGCGGGGT
GATCAGTGCG ATGACTGCGC CCCACCCAAC CTCGCCTCCC CCACCCCCGA GGCGGCGCCG
AGTTGCGCCG ACGGATGCCG TCCCGACCGT GCCGGCTAG
 
Protein sequence
MNTSTLTPER RTLLSRRSLW LAYATAGYNL LEGLVAIAAG AAASSTALIG FGLDSFVEVS 
SAAVVIWQFR SRVPEERERL ALRLIGVSFF ALAAWITVDA GRSLLGGGEA SPSPVGIGLA
VASLIVMPLL VRAKRRTGRE LGSATVMADS TQTALCTYLS AVLLVGLLLN AWLGWSWADP
IAALAIAAVA VREGVSAWRG DQCDDCAPPN LASPTPEAAP SCADGCRPDR AG