| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1638 |
|---|
| Symbol | |
|---|
| ID | 5705901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1878467 |
|---|
| End bp | 1879972 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641271146 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_001536521 |
|---|
| Protein GI | 159037268 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.178731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGC CGATCCCAGC GAACCTGCTG GACCGGACCC GCGCGGCGCT GAACCGCGCG
ATCGGCGTCT ACCGTGGCAC AGCGGACGAG CCGCAGCTGG TGGCGATCCG CGACCGCCTC
GACGAGCCGC TGCGGGTGGC CATTGCCGGC CGGGCGAAGG CCGGCAAGTC GACGCTGCTC
AACGCCCTGG TCGGAGAACG ACTGGCGCCG ACCGACACGG GTGAGTGCAC CCGCGTCGTG
ACCTGGTACG CCGACGGCCA CACCTACCGG GTCACCGCGC ACGTCGCTGA CCAACCTCCC
GTTCAGCTGC GGTTCAGCCG TGACGACGGC GCGATCGAGA TCGACCTCGC CGGCCGGGCA
CCGGAGGAGA TCGACCACCT CACCGTGATC TGGCCCTCGC AGGCCCTGAG GACCACCACG
CTGGTCGACA CCCCCGGCAT CGGATCCCTG ACCGACCGGG TGTCCCGGCG GTCCTGGGAC
CTGCTCGCCG CCGACGGCGC GGAGGAGGAA GCGATGCCCA CCGATGCGGT GCTCTACCTC
ATGCGGCACG TGCACGCCTC CGATATGGAA TTTCTCAAGG CCTTTCGGGA CAGCGAGGTG
TCTCGGCCCA ATCCGATCAA CGCTATCGGT GTCCTGTCCC GCGCCGATGA GATCGGTGTC
GGTCGGATCG ACTCGATGGC GTCGGCGCAA CGCATCGCCT CACACCTGAC AATGGACCCG
AGAATGCGCC GGATGGTGCA GACCGTCGTG CCCGTGGCGG GCCTGTTGGC GGAGACTGCG
GCAACGCTCA CCGAGGCCGA GATGGAGCGG CTGCGACGCA TCGCGAAGCT GGCACCCCGC
GATGTCGAGG CACTGCTGCT GTCCGCCGAC CGGTTCCGAG AGTCGATGCC GGAACTGGGG
CTGACCAGGA TCGAGCGAGA CGTGCTGCTG GCGCGGTTCG GCCTGTTCGG CCTGCGACTG
GCGGCGGCGA TAGTACGGCA GCGAGTGGTG CGGACCGCCG GCGAGTTGGC CCGGGAGTTG
TCGGAGCGAA GCGGCCTGGT CGAACTCAGG GCGGTGCTCG GCTCACTGTT CTTCGAACGG
CGCGACGTGC TCAAGAGCCG ATCGGCACTG CTGGCCATGG ACGCCCTCAC CCGCACCCGC
CCCGCACCAG GTAGCGAGGC GACCGCGGCC GAGGTGGAGG AGATCTTGGC TGGTGCGCAC
CCCTTCAGCG AGCTGCGGGT GCTGACCTCG GTGCGGGCTG GCTGGGTCAC CGGCAAGCCC
GCCGTCATTG ACGACTTGGA GCGGCTCATC GGCGGTCAGG GCGTTGCGCC GCACGTCCGC
GTGGGTCTGG AGCCGGACGC GTCGCCGCAG GAACTGACAT CGGCGGTCCA CGCCGCGCTC
GAACGTTGGC AGATACGGTG CGAAAGCCCG ATGACCAGCC GTGAGATGGC GATTGCGGGC
CGGATCGCCG TCCGCTCCTG CGAGGGGATG CTTGCCTCAC TGACCGGCGG CGGCCAGGGC
GAATGA
|
|---|
| Protein sequence | MTRPIPANLL DRTRAALNRA IGVYRGTADE PQLVAIRDRL DEPLRVAIAG RAKAGKSTLL
NALVGERLAP TDTGECTRVV TWYADGHTYR VTAHVADQPP VQLRFSRDDG AIEIDLAGRA
PEEIDHLTVI WPSQALRTTT LVDTPGIGSL TDRVSRRSWD LLAADGAEEE AMPTDAVLYL
MRHVHASDME FLKAFRDSEV SRPNPINAIG VLSRADEIGV GRIDSMASAQ RIASHLTMDP
RMRRMVQTVV PVAGLLAETA ATLTEAEMER LRRIAKLAPR DVEALLLSAD RFRESMPELG
LTRIERDVLL ARFGLFGLRL AAAIVRQRVV RTAGELAREL SERSGLVELR AVLGSLFFER
RDVLKSRSAL LAMDALTRTR PAPGSEATAA EVEEILAGAH PFSELRVLTS VRAGWVTGKP
AVIDDLERLI GGQGVAPHVR VGLEPDASPQ ELTSAVHAAL ERWQIRCESP MTSREMAIAG
RIAVRSCEGM LASLTGGGQG E
|
|---|
| |