Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1567 |
Symbol | |
ID | 5707512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1802082 |
End bp | 1803041 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271079 |
Product | hypothetical protein |
Protein accession | YP_001536454 |
Protein GI | 159037201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.952143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00926159 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACGACG ACACCGATGG GCGGCCGGTG AAGCAGCCCC GCCAGGTGCG CCGGCTCAGC AAGCGCCTGG ACGTGGCCCG GCAGCTTCAC GACCTGGAAC AAGACTCCGC CCTGGACATT GTGGAGATCG ATCGGCTGCG GGTGAGCGTG ACCCGTCACC TGTGGATGTT CCTCGCGATC GGCTTGTTCT TCACCACCAC AGGCGTGCAC GACTTCCTCG CCGGTGATCT CACTCCGGCA AACCCGGTGT GGTGGGGAAG CTGGGGCGTG GAGCCCTGCC TCGCCGGAAT CCTGATCACC ATCCTGCGGT GGGAAGCCGC GATGATCGCC CGCGACATCG CCATCGACTC CCGGGTGGTC GCCTGGCTGA AACGCTTCCT GCTCGGCTGC ACCCTGATCA TGAACGTGGT GCCGGTCCTG ATGCCCCGCC ACGGCGGTAT CAGCCCCGGA ATGCTCGCCG CGCACATCAT GGTGCCGATC CTGGTCTTCC TCCTGGCCGA GGTCATGCCG ATCGTCCAGG CCCGCTGCAT GCAAGCCCGC CGCGCCATCA CGCTGCCCAC CCCGAAACGC CCGCAGCCCG TACCCGCCCC GGCACCGGCA CCCGTTCCAG CTCCAATCAG CATGCCGGCC CCCGTGATGA AACCGCCGGC ACCCCCAGCC CCAGCCCCAG CCCCGGCTCC GGCTCCAGCC CCGGCTCCGG CTCCAGCCCC GGCTCCGGCT CCGGCTCCGG CTCCGGCTCC GGCTCCGGTT AGCAGCCTCG CTGAGGTGAG CTCGCCGTTG TCTCTGGACG GACTGGGTAT CCCCGCCGGG GTGCAAACCC AGATTCGCCG TCTCGTCACC GACCTGGACC GGCCGGTCAC CGCCGCTGAC ATTCAGCAGG CCACCCGACT ACCGCTACCT CTCGCCACCC GGGTCGCGGA CCGGCTCACC CCCGCCGGCA TGAACGGGCA CGCCCACTAA
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Protein sequence | MDDDTDGRPV KQPRQVRRLS KRLDVARQLH DLEQDSALDI VEIDRLRVSV TRHLWMFLAI GLFFTTTGVH DFLAGDLTPA NPVWWGSWGV EPCLAGILIT ILRWEAAMIA RDIAIDSRVV AWLKRFLLGC TLIMNVVPVL MPRHGGISPG MLAAHIMVPI LVFLLAEVMP IVQARCMQAR RAITLPTPKR PQPVPAPAPA PVPAPISMPA PVMKPPAPPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPV SSLAEVSSPL SLDGLGIPAG VQTQIRRLVT DLDRPVTAAD IQQATRLPLP LATRVADRLT PAGMNGHAH
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