Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1553 |
Symbol | |
ID | 5706755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1787387 |
End bp | 1788460 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271064 |
Product | hypothetical protein |
Protein accession | YP_001536440 |
Protein GI | 159037187 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0165231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00912158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTTC TGACAAGCCG TCCCGTCGTG CGTTGGCTGG TTCCGGTGGC CGCCGTCGTG ACCGTCATCG GCGGGGGCGC CGCACTGGGC CGGTTCGCCG CCGAGGCCGA GCCGAGCCTG CCGCCCCGGT CCGCCGCCCA GCTTCTGGTC GATCTTCAGA CCGCCCGTTT CGAGGGCTTG TCCGGCACCG TCGTGCAGCG AGCAGACCTC GGTCTGCCGC CGATCGCCGG GCTGCTCGCC GACGACGGTC CGGCCAACCT GCTGACCGGC TCGCACACCT TGCGGGTCTG GCACTCGGGG CCAAAGCAGC AGCGGATCGC GCTCGTCGAC ACGCTCGGGC AGCGGGACTT CATCCGGGAC GGGCGGGACG TGTGGCTGTG GAACAGCCGG ACCAACACGG CCACCCACCG GGTGCTGGCC GACGACGAGG ACGTGGCGGT TCCGCCGGGG GTGCCGGCGA CACCGCAGGA TGCTGCCGCG CAGGCACTCG CCGCGATTGA CCCGACGACC GAGGTCAGCG TTGGACGGGC GGCCACGGTC GCCGGGCGGG ACGCCTACGA GTTGGTGCTG GCGCCTCGGG ATGCCGCTTC CCTGGTGCAC CAGGTCCGGA TCGCCATCGA CGCGACCGAG CATCTGCCGC TGCGGTTCGA GGTCTTTGCC GAGGGTGGGG ACCGCCCGGC GTTCGAGGTG GCGTTCACCC AGATCGACTA TGCCCGGCCG GATCCCGACC AGTTCACCTT CAATCCGCCG CCGGGTGTGC AGATCACCGA GAAGAAGGGT GGCTGGGACC ATCCGGAGTC GCGGGACGAC GAGGAGCAGC CGGACCTGCG TGCCGTCGGC ACGGGCTGGA CCACGGTCCT GGTCGCGAAG GTCGGCGACG TGGGTTCCGC TACTGCCGCC GAGGATGTGC CCGACCTGGA CCTGCTCGCC GGGCAGTTGC CGGCGGTCCA GGGCGACTGG GGCAGCGGTC GGCTGTTCCG CAGTGATCTG GTGACGGCGC TGCTCACCGA CGACGGGCGG CTGATCGTCG GGGCGGTGTC CCCGGAACGG CTGTACGAGG TGGCCCGGGG CTGA
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Protein sequence | MSVLTSRPVV RWLVPVAAVV TVIGGGAALG RFAAEAEPSL PPRSAAQLLV DLQTARFEGL SGTVVQRADL GLPPIAGLLA DDGPANLLTG SHTLRVWHSG PKQQRIALVD TLGQRDFIRD GRDVWLWNSR TNTATHRVLA DDEDVAVPPG VPATPQDAAA QALAAIDPTT EVSVGRAATV AGRDAYELVL APRDAASLVH QVRIAIDATE HLPLRFEVFA EGGDRPAFEV AFTQIDYARP DPDQFTFNPP PGVQITEKKG GWDHPESRDD EEQPDLRAVG TGWTTVLVAK VGDVGSATAA EDVPDLDLLA GQLPAVQGDW GSGRLFRSDL VTALLTDDGR LIVGAVSPER LYEVARG
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