Gene Sare_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1553 
Symbol 
ID5706755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1787387 
End bp1788460 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content72% 
IMG OID641271064 
Producthypothetical protein 
Protein accessionYP_001536440 
Protein GI159037187 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0165231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00912158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTTC TGACAAGCCG TCCCGTCGTG CGTTGGCTGG TTCCGGTGGC CGCCGTCGTG 
ACCGTCATCG GCGGGGGCGC CGCACTGGGC CGGTTCGCCG CCGAGGCCGA GCCGAGCCTG
CCGCCCCGGT CCGCCGCCCA GCTTCTGGTC GATCTTCAGA CCGCCCGTTT CGAGGGCTTG
TCCGGCACCG TCGTGCAGCG AGCAGACCTC GGTCTGCCGC CGATCGCCGG GCTGCTCGCC
GACGACGGTC CGGCCAACCT GCTGACCGGC TCGCACACCT TGCGGGTCTG GCACTCGGGG
CCAAAGCAGC AGCGGATCGC GCTCGTCGAC ACGCTCGGGC AGCGGGACTT CATCCGGGAC
GGGCGGGACG TGTGGCTGTG GAACAGCCGG ACCAACACGG CCACCCACCG GGTGCTGGCC
GACGACGAGG ACGTGGCGGT TCCGCCGGGG GTGCCGGCGA CACCGCAGGA TGCTGCCGCG
CAGGCACTCG CCGCGATTGA CCCGACGACC GAGGTCAGCG TTGGACGGGC GGCCACGGTC
GCCGGGCGGG ACGCCTACGA GTTGGTGCTG GCGCCTCGGG ATGCCGCTTC CCTGGTGCAC
CAGGTCCGGA TCGCCATCGA CGCGACCGAG CATCTGCCGC TGCGGTTCGA GGTCTTTGCC
GAGGGTGGGG ACCGCCCGGC GTTCGAGGTG GCGTTCACCC AGATCGACTA TGCCCGGCCG
GATCCCGACC AGTTCACCTT CAATCCGCCG CCGGGTGTGC AGATCACCGA GAAGAAGGGT
GGCTGGGACC ATCCGGAGTC GCGGGACGAC GAGGAGCAGC CGGACCTGCG TGCCGTCGGC
ACGGGCTGGA CCACGGTCCT GGTCGCGAAG GTCGGCGACG TGGGTTCCGC TACTGCCGCC
GAGGATGTGC CCGACCTGGA CCTGCTCGCC GGGCAGTTGC CGGCGGTCCA GGGCGACTGG
GGCAGCGGTC GGCTGTTCCG CAGTGATCTG GTGACGGCGC TGCTCACCGA CGACGGGCGG
CTGATCGTCG GGGCGGTGTC CCCGGAACGG CTGTACGAGG TGGCCCGGGG CTGA
 
Protein sequence
MSVLTSRPVV RWLVPVAAVV TVIGGGAALG RFAAEAEPSL PPRSAAQLLV DLQTARFEGL 
SGTVVQRADL GLPPIAGLLA DDGPANLLTG SHTLRVWHSG PKQQRIALVD TLGQRDFIRD
GRDVWLWNSR TNTATHRVLA DDEDVAVPPG VPATPQDAAA QALAAIDPTT EVSVGRAATV
AGRDAYELVL APRDAASLVH QVRIAIDATE HLPLRFEVFA EGGDRPAFEV AFTQIDYARP
DPDQFTFNPP PGVQITEKKG GWDHPESRDD EEQPDLRAVG TGWTTVLVAK VGDVGSATAA
EDVPDLDLLA GQLPAVQGDW GSGRLFRSDL VTALLTDDGR LIVGAVSPER LYEVARG