Gene Sare_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1520 
Symbol 
ID5703564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1750798 
End bp1751502 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID641271026 
Productdethiobiotin synthase 
Protein accessionYP_001536407 
Protein GI159037154 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000244558 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTGGTGA CCGGCACCGA CACCGGGGTC GGCAAGACCG TGGCGACCTC GGCGATCACC 
GCGGCGGCGC AGGCCGCCGG GCTGCGGGTC GCGGTGGTCA AGCCGGGCCA GACCGGTACG
GCCACCGGCG ATCCGGGCGA CGTCGACGAG GTCACCCGGC TCGCCGCGCC CCTGACCGGC
CGGACGTTGG CGAGCTTCCC GGATCCGCTG GCGCCACTGG CGGCGGCCCG AGTCGCCGCG
TTGCCGCCGC TGGAGTTGTA CACGGCGGTC GACGCCGTCC GTGAGGAGAC CGACAAGCAC
GACCTGGTGC TGGTCGAGGG GGCCGGTGGG CTTCTCGTGC CGATGGGTCT GCGTCCGTCG
GGTGAGCCGT GGACGATGGC GGATCTCGCG GTCGCCCTCG GTTGTCCGGC GGTGGTGGTG
GCACGAGCCG GCCTGGGCAC ACTCAATCAC ACCGCGCTCA CCCTGGAGGC GTTGGAACGG
CGGGCGGTGC CGGCGGGGGT GCTGCTCGGC GCCTGGCCGG CCGAGCCGGA GCTGGTGCAC
TGGGCGAACC TGTCCGACCT GGTGCCGTAC CTGCTCGGCG CGTTGCCGGC CGGGGCCGGG
GCCATCGATC CAGGCGTGTT CCGACGGTCC GCGCCGGGGT GGCTGACCCC GGCGCTGTAC
GGGGTGCTCG ACGACTGGCG GACCTGGGCC GAAGAGGTCA GCTGA
 
Protein sequence
MLVTGTDTGV GKTVATSAIT AAAQAAGLRV AVVKPGQTGT ATGDPGDVDE VTRLAAPLTG 
RTLASFPDPL APLAAARVAA LPPLELYTAV DAVREETDKH DLVLVEGAGG LLVPMGLRPS
GEPWTMADLA VALGCPAVVV ARAGLGTLNH TALTLEALER RAVPAGVLLG AWPAEPELVH
WANLSDLVPY LLGALPAGAG AIDPGVFRRS APGWLTPALY GVLDDWRTWA EEVS