| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1404 |
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| Symbol | |
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| ID | 5704090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1621848 |
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| End bp | 1622684 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270914 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001536295 |
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| Protein GI | 159037042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000282005 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAGTTCA CCAAGGGGCA CGGCACCGGC AACGACTTCG TGATCCTGCC CGATCCGGAC
GGCACGCTCG AACTGACCCC CGGTCTGGTC GCGGCGCTGT GCGACCGGCG GCGGGGGATC
GGCGGGGACG GCGTGCTGCG GGTGGTCCGC GCGGCGCACC ACGCCGACGG AGTGGCCCTC
GCCGACGAGG CCGAGTGGTT CATGGACTAC TGGAACTCGG ACGGCTCCGC GGCCGAGATG
TGCGGCAACG GCGCCCGGGT CTTCGTGCGT TACCTCCTGG AATCCGGGCT GGCGGCGCCT
TCCGGTGCGG TGCTGCCGGT GGCCACCCGG GCTGGCGTCG TGCGGGCGCG GGTCGAGGGG
GAGGGGGTGG CCGTCGAGAT GCGTCGGCCC CGGTTGGCCG GCGCTTCGGT CGCGGGGCTC
GGCGGTCTGG CGCTGCCGGG CACGGCCGTC GACGTCGGGA ACCCGCACCT GGTCTGCCCG
GTGCCGGCCG GTTTGGAACT GTCCGCTCTC GATCTCACCC GGGCCCCGGA GTTCGACCCG
GTGGTCTTCC CGGCCGGGGT GAATGTCGAG TTCGTTACCG TCGGTGATCC GGTGGACGGC
GCCGACGGTC ACGTCCGGAT GCGGGTTTAC GAGCGGGGCA GCGCGGAGAC TCACTCCTGT
GGCACGGGTG CGTGCGCGGT GGCCGCGGTC GCGCTGCGGG ACGGGGGCCG GGACACCGGA
GTGGTCGCTG TTGACGTGCC CGGCGGTCGC CTGGTGGTGA CCCTGACCAC CCAGAGCTGC
TGGTTGTCCG GGCCCGCCGT GCTGGTGGCG ACCGGCGAGG TGAGCCGCGG CTGGTAG
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| Protein sequence | MEFTKGHGTG NDFVILPDPD GTLELTPGLV AALCDRRRGI GGDGVLRVVR AAHHADGVAL
ADEAEWFMDY WNSDGSAAEM CGNGARVFVR YLLESGLAAP SGAVLPVATR AGVVRARVEG
EGVAVEMRRP RLAGASVAGL GGLALPGTAV DVGNPHLVCP VPAGLELSAL DLTRAPEFDP
VVFPAGVNVE FVTVGDPVDG ADGHVRMRVY ERGSAETHSC GTGACAVAAV ALRDGGRDTG
VVAVDVPGGR LVVTLTTQSC WLSGPAVLVA TGEVSRGW
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