| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1382 |
|---|
| Symbol | |
|---|
| ID | 5707301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1595920 |
|---|
| End bp | 1596891 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641270892 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001536273 |
|---|
| Protein GI | 159037020 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.341345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0711224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGATC TGCTAGGCCT TTCAGCGCAG CACGAGACGG TCTATCGGGC CATGCTCCAG
CGGCCGGACC TGAACGTTGC TGGTCTGGCC GACTATCTGG GCGTCCCGCC CGGCCAGGTG
CGGGAAGCGC TCGATGTGCT GGCCGACCTG GCGTTGATCC GACTCGACTC GGGCGGCAAC
AGTGCCCGCG CGGTTCGGCC CCAGGCCGGG CTGATCGCGC TCCTGGCCAA GGTGGAAGCG
GACGTCGCGG TACGACAGCG GCAGGTCGAG GCGACCCGGG CCGCGATCAC CGCCATCGCC
ACCGCGCACG AAGGCCGCGA ACAGGAAGTG CAGGGGCGTG CCCTGGACGG ACTCGACGCC
GTTCGGGAAC GGCTGATCGA GCTCGCCCAC AACGCCCGCA GCGAATGCCT CTCCTTCACC
ACCGGCCGCG GCCAGCAGCC GGACACCATG GAGGCCGAAG GTTCACTCAA TCAGGTCGCG
TTGAGGCGGG GGGTCCGCAT CCGCAACCTC TATCAGGAGA GCTTCCGCAA CGATCCCGCC
ACCCTCGCGC ATGCCCGGTG GATGGCGAGT CTGGGCAGCC AGTCCCGCAC CGCACCGACA
CTGCCGATGC GTATGGTGAT CGTCGATCGT GAGCTGGCGC TCGTACCCGT CGATCCGAAC
GACCCCGCGC GGGGCGCCCT GGAGCTGCGT AGTCCCGGCG TGGTCGCGGG GCTGATCGCG
CTCTTCGAGC AGGTCTGGCA CACGGCGAAG CCATTCGGGG ACGAGGCGTC CCCAGATGAA
CAGGGCCTCA CCGCCCAAGA ACGAGAACTG TTACGCCTGC TTGCGGCGGG TAGCACCGAC
GAGTCAGCGG CCCGAAAGCT AGCGATCTCG GTGCGAAGCG TCCAACGCAT GATGACCTCC
CTGACCGAAC GGCTTGAGGC GGCCAGTCGG TTCCAGGCCG GGGTCCAGGC CACCCGCCGC
GGCTGGGTGT GA
|
|---|
| Protein sequence | MLDLLGLSAQ HETVYRAMLQ RPDLNVAGLA DYLGVPPGQV REALDVLADL ALIRLDSGGN
SARAVRPQAG LIALLAKVEA DVAVRQRQVE ATRAAITAIA TAHEGREQEV QGRALDGLDA
VRERLIELAH NARSECLSFT TGRGQQPDTM EAEGSLNQVA LRRGVRIRNL YQESFRNDPA
TLAHARWMAS LGSQSRTAPT LPMRMVIVDR ELALVPVDPN DPARGALELR SPGVVAGLIA
LFEQVWHTAK PFGDEASPDE QGLTAQEREL LRLLAAGSTD ESAARKLAIS VRSVQRMMTS
LTERLEAASR FQAGVQATRR GWV
|
|---|
| |