| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1358 |
|---|
| Symbol | |
|---|
| ID | 5705572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1566624 |
|---|
| End bp | 1567499 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641270869 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_001536250 |
|---|
| Protein GI | 159036997 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0394632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000215564 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACC CGTTCGTCAA GGGTTGGAAA TATCTGATGG CGCTCTTCGG CACCAAGCTC
GACGAGCGCG CAGATCCGAA GGTGCAGGTC CAGCAGGCCA TCGAGGAGGC GCAGCGCCAG
CACCAGACGC TCGTCCAGCA GGCCGCAGCG GTGATCGGCA ACCAGCGGCA GCTGGAGATG
AAGCTGTCCC GGCAGATGTC CGAGGTCGAA CGGCTGCAGG GCAACGCGCG CCAAGCCCTG
GTGCTGGCCG ACCAGTCCCG CGCGAAGGGC AGCGAGGCCG AGGCCACCCG CTACGAGCAG
TCCGCCCAGG CCCTCGCCAC CCAGTTGGTC TCCGCCGAGC AGGCCACCGA GGACCTGAAG
ACCCTGCACG ACCAGGCACT CGGCGCGGCG GCGCAGGCGC GTAAGGCGGT CGAGAACAAC
TCGATGATCC TCCAGCAGAA GCTCGCCGAA CGGGCGAAGC TGCTCAGCCA GCTGGAGCAG
GCCAAGATGC AGGAGTCCGT CGCCGCCTCG CTGGAGTCGA TGTCGGCGAT CACCGCGCCG
GGCACCACCC CCACCCTGGA CGAGGTGCGC GAGCGGATCG AGCGACGGTA CGCCAACGCG
ATGGGCCGGG CCGAACTCGC CAGCAACTCG GTCGAGGGGC AGATGCTGGA CATCCAGCAG
GCGGCCCTCG ACGCGGCCGG CTCCGCCCGG CTCGACCAGA TCCGCGCCGG CATGACCGGT
GAACAGCTCG GCGGCGCCGC CCAGCGGCCG GCCGTGGCGC AGCCCGAGCA GCAGGACGTC
CCGGTCACCG ACCCGGCGGC CGTGGCCCGG CTCGACGAGA TCCGGTCCAG TCTGAGCCGG
GAGCGCGGCA CCGGGGGCAG TGCCGCCGCC GGTTGA
|
|---|
| Protein sequence | MANPFVKGWK YLMALFGTKL DERADPKVQV QQAIEEAQRQ HQTLVQQAAA VIGNQRQLEM
KLSRQMSEVE RLQGNARQAL VLADQSRAKG SEAEATRYEQ SAQALATQLV SAEQATEDLK
TLHDQALGAA AQARKAVENN SMILQQKLAE RAKLLSQLEQ AKMQESVAAS LESMSAITAP
GTTPTLDEVR ERIERRYANA MGRAELASNS VEGQMLDIQQ AALDAAGSAR LDQIRAGMTG
EQLGGAAQRP AVAQPEQQDV PVTDPAAVAR LDEIRSSLSR ERGTGGSAAA G
|
|---|
| |