Gene Sare_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1353 
Symbol 
ID5705567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1562016 
End bp1562936 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content75% 
IMG OID641270864 
Productornithine cyclodeaminase/mu-crystallin 
Protein accessionYP_001536245 
Protein GI159036992 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000224903 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACTAC TCCTCACCGA CCCTGAGGTC GCCGCCGCGC TCGACGCACC GACGACGGTC 
ACCGCGATGC GGGACGCGCT GCGCGCCGCC TACGACGGTC GACTGGTCGC CCCGCCCCGC
GCCACCGCGA CGCTCGACGG TGGCCGGATG GTGCTGACCG CCGGGCATCT CGTCGGCGAG
TGGTACGGCT TCCGGTCCTA CGACACGTTC GGGCTGCCGG AGGGCGAGCA GGTGGTGGTG
CTGCACGACG CCCGCACCGG TGTCGTCCGG GCGGTCGCGG TCGGGGAGGA ACTGGGCTCC
CGCCGTACGG GCGGGCTGGG CGGGGTCGCC ATCGACGCGC TGGCCCGCCC GGACGCGGCC
ACGCTCGGTG TGGTCGGCTC GGGTCGGCAG GCGTGGACGC AGGTCTGGGC CGCAGCGGCG
GTCCGGCCGT TGCGGGAGGT GAGCGTGCAC AGCCGCTCGG CGGCGCGGCG TACGGCGTTC
GCCGACCGGA TCCGTGCCGA ACTGGGCGTC CCGGCCCGGG CTGTCGGCTC GGCCGCGGCG
GCCGTCGCCG ACCGGGACAT CGTGGTGATC GCCACCACCA GTACCACCCC GGTGGTGGAC
GCCGCCGACC TTGCGCGGGG CGCACACGTC AACGCGGTCG GCTTCAAGCA GGTCGACCGG
CACGAGTTCG GACCCGACCT GCTGGACCGG GCCGAGGTGC TGGCCACCGA CTCACCGGCC
CAAGCGGTGG GGTACACCCC GCCGATGCTC GCCGCCCTGC CTCCGTACGC GGGACGGCTG
CGCGACCTGG GCGCGGTCCT GGCCGGGGCG GTGCCCGGTC GGACCAGCGC GGACCAGATC
TCCGCCTTCT GCTCGACCGG CCTGGCCGGC ACCGAGGTCT TCCTGCTCGA TCGCATGGTC
CGGGTCGCGG CGACGACCTG A
 
Protein sequence
MSLLLTDPEV AAALDAPTTV TAMRDALRAA YDGRLVAPPR ATATLDGGRM VLTAGHLVGE 
WYGFRSYDTF GLPEGEQVVV LHDARTGVVR AVAVGEELGS RRTGGLGGVA IDALARPDAA
TLGVVGSGRQ AWTQVWAAAA VRPLREVSVH SRSAARRTAF ADRIRAELGV PARAVGSAAA
AVADRDIVVI ATTSTTPVVD AADLARGAHV NAVGFKQVDR HEFGPDLLDR AEVLATDSPA
QAVGYTPPML AALPPYAGRL RDLGAVLAGA VPGRTSADQI SAFCSTGLAG TEVFLLDRMV
RVAATT