| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1336 |
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| Symbol | truB |
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| ID | 5703867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1542196 |
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| End bp | 1543113 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270847 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001536228 |
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| Protein GI | 159036975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0671374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00117638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGACCAG CCCGTCTGGC AGGCTTGGCG GTCGTGAGCA CAGACGGACT GATCGTGGTC
GACAAGCCCG GCGGCATGAC GTCGCACGAC GTGGTGGCAC GGGTGCGGCG CCTGGCCCGT
ACCCGACGGG TCGGGCACGG CGGCACGCTC GACCCGATGG CCACCGGCGT CCTGGTCGTC
GGCGTCGGCC GGGCCACCCG GCTGCTGACC TACGTGATCG GGGCCGGCAA GAGTTACACC
GCCACGATCC GCCTGGGGCA GGCGACGGTC ACCGACGACG CCGAGGGCGA CGTGATCGCC
AGCACCCCGG CCGGTCGGGT GACCGAGGAC GCGGTCCGGG CCGCGCTGGC CGCGCAGACC
GGTGACGTCG ACCAGGTGCC CAGCGCGGTC AGTGCCATCA AGATCGATGG TCAGCGGGCG
TATCGTCGGG TGCGGGAGGG GAAGGACGTC GACCTGCCGG CCCGGCGGGT CACCATCTCC
CGGCTCGAGG TACGGGCGCT GCGGCGGGAC GAACCGGACG TGGTGGACGT GGACGTGGAC
GTCACCTGCT CGTCCGGTAC GTACGTGCGG GCGGTCGCCC GTGACGCGGG CCTGGCGCTC
GGCGTCGGGG GCCACCTCAC CGCGCTCCGG CGTACCGCTG TGGGCGGTTT TACCCTCGCT
GAGGCCGCCA CCCTCGATGA CCTGGAGCGC CGTGCCCCCG AGGTGGTCAC GCTGTCACTG
CCGGCGGCGG CCGACCGGTC CTTCCCGCGT CGGGAGGCGA CCGCCGAGGA GGAGCGGGTG
CTCTCCCACG GGGGTCCGCT GGATCCGGTG GGGATCGACG GCCCCTACGC CGTCTTCGGC
CCGGCGGGTG GGTTGGTCGC TATCGTCAGC GAGCGGGCCG GTCGGGCCCG CGCGGAGATC
GTGCTGGCCC CGGCCTGA
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| Protein sequence | MRPARLAGLA VVSTDGLIVV DKPGGMTSHD VVARVRRLAR TRRVGHGGTL DPMATGVLVV
GVGRATRLLT YVIGAGKSYT ATIRLGQATV TDDAEGDVIA STPAGRVTED AVRAALAAQT
GDVDQVPSAV SAIKIDGQRA YRRVREGKDV DLPARRVTIS RLEVRALRRD EPDVVDVDVD
VTCSSGTYVR AVARDAGLAL GVGGHLTALR RTAVGGFTLA EAATLDDLER RAPEVVTLSL
PAAADRSFPR REATAEEERV LSHGGPLDPV GIDGPYAVFG PAGGLVAIVS ERAGRARAEI
VLAPA
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