| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1334 |
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| Symbol | |
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| ID | 5703865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1540378 |
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| End bp | 1541706 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641270845 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001536226 |
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| Protein GI | 159036973 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.433574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.014892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGC CGGTCGCCAC CGCTCCCCGG GCCGCCTCGC CCCGCAGGAT CGCCGCACTC
GCCCTGCCGG CCCTCGTGGT ACTGGCCGCC GAGCCGCTGT ACGTGCTGGT CGACACGGCG
GTGGTGGGGC ACCTCGGCCG GGTTCCGCTC GCCGCGGTGG CGATCGGCGG CACAGTGCTG
ACGCTCATCG CCTGGCTCGG TACGGTCGTC GCGTACGGCA CCACCGGACG GTCTGCCCGA
CGGTTCGGGG CCGGTGATCG CTCCGCCGCC GTGGCCGAGG GCGTCCAGGC GTCCTGGCTT
GCTCTCGCGG TGGGGATCGC CGTCGCAGTC GGCATGCAGG TCGGCGGCGG TGTGCTCGCC
CGCACCCTGG CCGGGGCCGA CAACGACGTG GCTGACGCTG CCGCGCAGTG GCTGCGTATC
GCGGCCCTCG GCGCGCCGGG CCTGCTGCTC GCCGCGGCCG GCAACGGCTG GCTGCGGGGC
ATCCAGGACA CCCGCCGGCC GCTGTGGTTC GTGCTCGGCC CGAGCCTGCT CTCCGCGGTG
CTCTGCCCGC TGCTGGTCTA CCCGGCCGGG CTCGGCCTGC CCGGCTCGGC GGTGGCCAAC
GTCGTGGCCC AGACCCTCTC CGGTGTCCTC TTCGCCGGGG CGCTGGTCGC CGAGCGGGTG
GCCCTACGCC CCCGTCCCCG GGTCCTCGCC CAGCAGCTCG TGCTCAGTCG GGACCTGCTC
ATCCGCGGTG TCGCCTTCCA GGCGAGCTTT CTGTCCGCCA CCGCGGTGGC CGCCCGGTTC
GGCGCGGCCG TCGTCGGCGC CCACCAGATC GCCCTGCAAC TGTGGTTCTT CACCGCCCTG
GTGCTCGACG CGCTCGCCAT CGCCGCGCAG GCTCTCGTCG GCGCCGCGCT GGGTGCCGGC
GACGCGGCCG AGGCACGCGG ACTGGCCCGC CGGATCGGGC TGCTCGGTGC CGCCTGCGGT
GGGGCGTTCG CGCTGCTCAT CGCCGCCGGC GCCGGCGTTG TCCCGGGATG GTTCAGCGAC
GATGGGCAGG TACGCGAGCA GGCGATGGTG GCCTGGCCCT GGTTCGTGGC GATGCTGCCG
CTGGCCGGTG TCGTCTTCGC CCTGGACGGG GTGTTGATCG GTGCCGGGGA CGTCCGCTAC
CTGCGTAACC TCACAATCGT GGCGGCTCTG GGCGGGTTCC TGCCGGCCAT CTGGCTGGCG
TACGGACTCG ACCTCGGACT CGGTGGGATC TGGGCTGGGC TCACGCTCTT CGTGGTGCTT
CGGCTGATCG CCCTGCTGCT GCGGCTGCGC TCCGGGCGCT GGGCCGTGGT CGGCGCCGTC
CGGGCCTGA
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| Protein sequence | MNSPVATAPR AASPRRIAAL ALPALVVLAA EPLYVLVDTA VVGHLGRVPL AAVAIGGTVL
TLIAWLGTVV AYGTTGRSAR RFGAGDRSAA VAEGVQASWL ALAVGIAVAV GMQVGGGVLA
RTLAGADNDV ADAAAQWLRI AALGAPGLLL AAAGNGWLRG IQDTRRPLWF VLGPSLLSAV
LCPLLVYPAG LGLPGSAVAN VVAQTLSGVL FAGALVAERV ALRPRPRVLA QQLVLSRDLL
IRGVAFQASF LSATAVAARF GAAVVGAHQI ALQLWFFTAL VLDALAIAAQ ALVGAALGAG
DAAEARGLAR RIGLLGAACG GAFALLIAAG AGVVPGWFSD DGQVREQAMV AWPWFVAMLP
LAGVVFALDG VLIGAGDVRY LRNLTIVAAL GGFLPAIWLA YGLDLGLGGI WAGLTLFVVL
RLIALLLRLR SGRWAVVGAV RA
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