Gene Sare_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1315 
Symbol 
ID5708393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1522044 
End bp1523351 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content71% 
IMG OID641270826 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001536207 
Protein GI159036954 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0831973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA TCCCCTTCTC CGTGCAGATC CTGCTCGGTC TCGCCCTCGG TGTGACGCTC 
GGCTACGTCG CCCGAACCAA TGACCTGAGC TGGCTGGCCA GTAGCCTCGA CACCGTCGGT
GGCCTCTTCG TGCAGCTACT CAAACTCGCC GTGCCACCAC TGGTCTTCAC CGCCATCGTG
GTCAGCGTGG TCAGCCTGCG GGGCGTCGCC AACGCCGCCC GGCTGGCCCT GCGGACGCTG
CTGTGGTTCG GTGCCACCGC GCTGGTCGCG GTGAGCGTCG GCATCGGCCT CGGGCTACTC
ACCAACCCCG GTCGCGGGGT CACCCTGGAC ACGGCCGGCG CCGCCGCCCC GACCAAGACG
GGCTCCTGGA CCGACTTCCT CACCGGCATC GTCCCGACCA ACCCGGTCGG CGCGTTCGTT
GAGGGCAACG TCCTCCAGAT CGTCTTCCTC GCCCTCGTCG TCGGCGCGGC AGCCCTGCTG
GTCGGCCCGC CCGCGGAACC GTTCGTCGAG CTCAACCGGG CCCTGCTGGG GATCGTCCAG
AAGGCTTTGT GGTGGGTGAT CCGGCTCGCC CCGATCGGAA CCCTGGGCCT GATCGGCAAC
GCCGTCGCCA CATACGGCTG GGACCTGCTG GCCCCGCTCG CCCGCTTCAC CACCGCCGTC
TACGTCGGCT GCGCGATCGT GCTGTTCGTC GTCTACCCGC TGCTGTTGGT CGGCGCCGGC
CGGCTCAACC CGGTGCGCTT CTTCGCCGGC GCCTGGCCGG CGATCCAGTT GGCCTTCGTC
TCCCGCTCCT CGGTCGGCAC CATGCCGGTG ACCCAGCGCT CGGTCGAACG GCTCGGTGTC
CCCCGCGAGT ACGCCTCGTT CGCGGTGCCG TTCGGCGCCA CCACGAAGAT GGACGGCTGC
GCGGCGATCT ACCCGGCCCT GGCCGCGATC TTCGTGGCGC AGGTCTTCGG GGTGGACCTG
GGCGTCACCG ACTACCTGCT GATCGCCTTC GTCTCCGTGG TCGGCTCGGC GGCGACCGCC
GGCCTCACCG GTGCGATCGT CATGCTCACG CTGACGCTGA GCACGCTCGG CCTGCCGCTG
GCCGGCGCGG GTCTGCTGCT GGCCATCGAC CCTGTCCTGG ACATGATCCG CACCGCGACC
AACGTCGCCG GGCAGGCCCT CGTGCCGACG ATCGTGGCCT CCCGGGAGGG CATCCTCGAC
CGGGACGCGT ACGACTCGGC CGGCCGGCGG AGCCTGGTCG ACCACGACCC GGTGGAGCAC
GATTCACCGC CCGCCCGGCG CGAGGAGCCA GCTCCGGCCC TGGCCTGA
 
Protein sequence
MRKIPFSVQI LLGLALGVTL GYVARTNDLS WLASSLDTVG GLFVQLLKLA VPPLVFTAIV 
VSVVSLRGVA NAARLALRTL LWFGATALVA VSVGIGLGLL TNPGRGVTLD TAGAAAPTKT
GSWTDFLTGI VPTNPVGAFV EGNVLQIVFL ALVVGAAALL VGPPAEPFVE LNRALLGIVQ
KALWWVIRLA PIGTLGLIGN AVATYGWDLL APLARFTTAV YVGCAIVLFV VYPLLLVGAG
RLNPVRFFAG AWPAIQLAFV SRSSVGTMPV TQRSVERLGV PREYASFAVP FGATTKMDGC
AAIYPALAAI FVAQVFGVDL GVTDYLLIAF VSVVGSAATA GLTGAIVMLT LTLSTLGLPL
AGAGLLLAID PVLDMIRTAT NVAGQALVPT IVASREGILD RDAYDSAGRR SLVDHDPVEH
DSPPARREEP APALA