| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1274 |
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| Symbol | |
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| ID | 5704487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1475748 |
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| End bp | 1476560 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270789 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001536170 |
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| Protein GI | 159036917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00561367 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGCCG CGTCGACGCC GGTGCCCGCG ATCAGCGGCA CGACCCGGGT GTACGCGCTG
CTCGGCGACC CGATCGCGCA GGTGCGGGCC CCCGGCCTGC TGCACCCCCT GCTGGCCCGG
CGTGGCATCG ACGCCGTGTT CGTCCCGATG CAGGTGGCAG CGAGCGACGT CGCGCCGGTG
GTGCGCGCCC TGCGGCAGGT GGTCAACCTG CACGGCGTCC TCGTGACGGT GCCGCACAAG
GCCGCCGCCC TGGCCCTGGC CGATCGGGTC ACCGCCCGCG CGAGCCTGGC TGGCAGCGTC
AACGCGCTAC GCCGTGAGCC CGACGGCACC TGGTCGGCGG ACACCTTCGA CGGTGACGGC
TTCGTCCGTG GCCTCGTCGA GGCCGGGTAC GACCCCCGTG GCCTGCGGGT GTGCGTGGTG
GGTGCGGGCG GGGCGGGCAG CGCCATCGCC GTCGCCCTGC TCGACGCGGA GGTGGCCGAG
GTGCGTCTGG TCGACACCGA CGCCGGGCGA CTCGACACGC TGTGCCAGCG GCTCTCCGCC
GCGTACCCCG GTCGGGTCAC TGCCGCGACG GAGCCGCACC TGGCTGACGT CGACATCGCG
GTGAACGCGA CACCGCTGGG GCTGCGGCCC GACGACCCGC TGCCGTTTCC GGTGACCGGG
TTGCCGGCGC ACGCCGTGGT GGCCGACATC ATCATGAAGC CGGCGGAGAC GGCGTTGTTA
CGGGCGGCCG ACGAACGGGG CCTGACCGCC CACCCCGGTG AGCCGATGCT CACCCACCAA
CTGGACTCCT ACCTGGCCTT CTTCGCCCTC TGA
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| Protein sequence | MTAASTPVPA ISGTTRVYAL LGDPIAQVRA PGLLHPLLAR RGIDAVFVPM QVAASDVAPV
VRALRQVVNL HGVLVTVPHK AAALALADRV TARASLAGSV NALRREPDGT WSADTFDGDG
FVRGLVEAGY DPRGLRVCVV GAGGAGSAIA VALLDAEVAE VRLVDTDAGR LDTLCQRLSA
AYPGRVTAAT EPHLADVDIA VNATPLGLRP DDPLPFPVTG LPAHAVVADI IMKPAETALL
RAADERGLTA HPGEPMLTHQ LDSYLAFFAL
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