Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1266 |
Symbol | |
ID | 5704479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1465454 |
End bp | 1466464 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270781 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001536162 |
Protein GI | 159036909 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.051874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000127029 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGAATCG GCATCATGGG GTGCGCGAGC ATCGCCCGCC GGAAGACGCT CCCCGCCATG GCGGCACTTC CGGAAGTCGA GATCGCGGCG ATCGCCAGTC GGGACCTCGA CACTGCCGTG CTGACCGCGC GTGACTACGG CTGCCGCGCG GTCAAGGGCT ACGAGGCGCT GCTGGATCTC GACGAGGTCG AGGCCGTCTA CGTCCCACTG CCGAACGCCA TGCACGCAAG CTGGATCGAA GAGGCGCTGT TCGCCCGCAA ACACGTCCTC GCCGAGAAGC CGATGACCAC CAGCGGAGCC CGGACAGGTG AGCTGACAGC CAAGGCGCGG TCCCGCGGCC TGGTGCTCAT GGAGAACATG ATGTTCCTCC ACCACAGTCA GCACGCGGTG GTCAGGAGGC AGCTGGAAGA GGGCGCGATC GGCCACCTGT ACGCCTTCCA CGCCTCGTTC GCCGTACCGA GGCGCCCAGC CGGCGATATC CGCCACAGCG CCGAACTCGG CGGCGGCGCG CTCCTGGACA CCGGGGTCTA CCCCATACGC GCGGCGATGG CGTTCCTGGG CGGCAGCGAC ATGGCGGTTG TCGCGGCGGT GCTGACCTCC CGGCCCGGCC AGCACGTCGA CTCCTGCGGG CATGCTCTGC TGTCCACCGA GGGCGGCGTG GGCGCCCACC TGACCTTCGG CCTCGACCAC TCCTACCGGT CCAGCTACGA ACTCTGGGGC AGCGAGGGGC GAATCGCGAT CGAGCATGCC TACACCCCAC CCGCAGACCA CGTCCCGGTA CTGCGCCTGG AGCGAAAGTC GAGCGTTCAG GAGATCCGGC TGGCACCCGA CGACCAGGTG GCGAACTCGG TGCGGGCGTT CGCGACCGCT GTCCGATCGG GGCGTCTGCC CGACAACGGC AGCGTCCTGC GGCAGGCGGA CCTCGTGGAC GAGATCCGAG GCAGGGCCAG GCGCTGCACC GTACCGGCCG ACGAGCCGGT GGCCACGAGC CGGATGGCGG CGCCGGCATG A
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Protein sequence | MRIGIMGCAS IARRKTLPAM AALPEVEIAA IASRDLDTAV LTARDYGCRA VKGYEALLDL DEVEAVYVPL PNAMHASWIE EALFARKHVL AEKPMTTSGA RTGELTAKAR SRGLVLMENM MFLHHSQHAV VRRQLEEGAI GHLYAFHASF AVPRRPAGDI RHSAELGGGA LLDTGVYPIR AAMAFLGGSD MAVVAAVLTS RPGQHVDSCG HALLSTEGGV GAHLTFGLDH SYRSSYELWG SEGRIAIEHA YTPPADHVPV LRLERKSSVQ EIRLAPDDQV ANSVRAFATA VRSGRLPDNG SVLRQADLVD EIRGRARRCT VPADEPVATS RMAAPA
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