Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1242 |
Symbol | |
ID | 5704867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1392183 |
End bp | 1393169 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641270757 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001536138 |
Protein GI | 159036885 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.225329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0194042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACAGC TTGAGGTAGC GCTGATCGGC GCGGGATTGA TAGCGCGCTT CCACCTACAG GAATGGGTCG ACGCCGGAGT CGCCGTCCGG ATCCACTCCA ACGACGGCCG GGCCGCTGAG CTGGCAAGCG AGTTCGGTGC CAGGGCTGTC GGCTCGCTTG CCGAGGCGCT GAACGGTGTG GATGCCGTGG ACATCTGCAC CCCGACCAGC ACCCACCGCG AGATCGCCCT TGCCGCCATC AGCAAGGGCG TGGACGTGGT GTGTGAGAAG CCGTTGGCGG CCACCGCCGC AGACGCCGAG GACATCGTCG ACGCGGCGGA GCAGGCCGGT GTGCGGCTCT ACCCGGCCCA CTACGTGCGG TTCGCACCGG CATTCGCTCG GCTCCACGAT CTGGTGGCCT CCGGTCGCAT GGGTGAGGGT GCGGTCGCTC GGTTCTGCTT TTCCGCCTAC CATCCGCGGC CCTGGACCGA ACCCATATCC GCCCAGTCCG GCGGCATTTT GACCGACCAG ATGCTGCACG GTGTCGATAT CGCATATTGG ATTTTCGGGG AAGTCGTTCG GGTGTATGCC TGCTACCAGG GTGAGATCGC GGCTCCGGCT CCGGAGGGAA CCGTGGCGAC CGGCACCGCC GTACTCACCC ACGCCAACGG CGCGATCAGT CAGGTCGTGA GCCGGTGGAC CGCCACACCG CACCCGCCCG TCCGGGTGGC GTTCCACGTC TCGGGTACCG GCGGGACAGT GAGCCACGAC TCGCGCTGGC CCCAGCAGGT CAGGGTGGCC GACGGTCTGG CCGGCGACTT CGGCTACGGC GGGACGTCGG TGTTCGCCGC CGAGATACGC GAGTTCGCCG CTGCCTTCGC CGGAGGGCCG GAGCCGCGCC TGGGAGCCCG CGACGCGCTG GCCGCGGTTC GCCTCACCCA GGCTGCGGCG GAGTCCGCGT GGACGGGCCG TGCCGTGGAA GTGCCGGTGA AAGGAGTCGC CGCATGA
|
Protein sequence | MRQLEVALIG AGLIARFHLQ EWVDAGVAVR IHSNDGRAAE LASEFGARAV GSLAEALNGV DAVDICTPTS THREIALAAI SKGVDVVCEK PLAATAADAE DIVDAAEQAG VRLYPAHYVR FAPAFARLHD LVASGRMGEG AVARFCFSAY HPRPWTEPIS AQSGGILTDQ MLHGVDIAYW IFGEVVRVYA CYQGEIAAPA PEGTVATGTA VLTHANGAIS QVVSRWTATP HPPVRVAFHV SGTGGTVSHD SRWPQQVRVA DGLAGDFGYG GTSVFAAEIR EFAAAFAGGP EPRLGARDAL AAVRLTQAAA ESAWTGRAVE VPVKGVAA
|
| |