| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1224 |
|---|
| Symbol | |
|---|
| ID | 5706391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1372286 |
|---|
| End bp | 1373647 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641270741 |
|---|
| Product | regulator |
|---|
| Protein accession | YP_001536122 |
|---|
| Protein GI | 159036869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.483288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.967223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTAACG AACTTCTTGC CGACGCCCTC AGGAAAGCCG GTTGGTCTAA CAAGGGCTGC
GCAGCCCGCC TTCGGGCCGC GGGTGAAGTA CGCGGAATGG ATATCCGCTG CACCCACGTC
GACGTGCGCC GGTGGCTCGG GGGCATGCGG CCCCGGCCTC AGACCACCGG TCTGATCGCC
GAGGTGCTTG GTGACGCGCT GGGAGTAATG CTGACACCCT CGGCACTTGG CTTTGCCGAT
CAGGTACACA GCCGACTATC AGTCGATTCG CTGCACTATG CCGATGACCT ATCAGTTACG
TATCGAAGCC TAGCTGGCAC CATCGAGCAT GACATTTCTG CTTCTGTGGA GCTCCAAAAA
GCGGCGGCCG TGTCGACTGC GTGGGCTGGG CCACTTATGG CGTGGCTCCT ATCTCGGCCC
GATCCGGTGC GATCTAGCGC AACTGGACGG CGAGTAGGAA TGGCGGAGGT AACTGCGGTT
CGCTCGACCA TTAGAATGTT TATGAATCTT GACTTTCAAT TCGGCGGCGG CCATGCTAGA
ACGGCTCTCG CCCAATATTT TCGTCATGAC GTTTTGCCAT TGCTTGAAGG CAGCTATTCC
GAGAGGGTTG GGCAAAAGCT ATTTTCGGCG GCGGCGGAGG TGGCGCAACT TCTTGGTTGG
ACGGCTTATG ATCTCGGTCA GCATGGCTTA GCTCAACGCT ATCTAATTCA AGGTCTCCGC
TTGGCGCAGG CGGGTAGTGA CCGGGTAATG GGCGGTCGCC TACTCTCCAA TATGAGTCAT
CAAGCCAACT ATCTCGGACA GTACCAGGAG GCGGCTCAAC TTGCGCGTGC AGCGCAAGAG
GGTACGCGAG GTGCGGCGAG TGCCACAGTT TCGGCGATGT TTCTTGCAAT GGAGGCACGA
GCACGTGCAG GGGCTGGTGA CGCTCGTGGA TGTACAAGCG TCTTACGCGA GGCGGAAAGC
GCTTTTAATC GTCGCGGCGA GGGTGGCGAC CCGCCCTGGA TCTACTACTT CGATGAAGCC
GAAATGGCGG GCGAGGCTGC TCACTGTTTT CGAGATTTGC GCTCGCCAAA GCTGGCACTG
GAGTTCGTGA CGCGAGCAAT TGAGCTTACC GATCCTGTTT ACGTTCGTAC CCACGCCTTT
ATTCGACTCG TAAATGCAGC AAGCTGCCTC CATGCGAGCA AGCCGGATGC GGAAAAGGCT
GCTGAGGTTT CCCTTGAAGC AATCCGACTT GCTGGGTCAC TTAAGTCGGA ACGCTACCTA
CGATATGTTA GGGATCTGCG AGCCGACTTC ACGCCGGTTG CCACCAGCGT GGCGGCCAAA
CGGGCTCTGA ACGCCTTCGA CGCGCTGCTA GATTCAAACT AG
|
|---|
| Protein sequence | MPNELLADAL RKAGWSNKGC AARLRAAGEV RGMDIRCTHV DVRRWLGGMR PRPQTTGLIA
EVLGDALGVM LTPSALGFAD QVHSRLSVDS LHYADDLSVT YRSLAGTIEH DISASVELQK
AAAVSTAWAG PLMAWLLSRP DPVRSSATGR RVGMAEVTAV RSTIRMFMNL DFQFGGGHAR
TALAQYFRHD VLPLLEGSYS ERVGQKLFSA AAEVAQLLGW TAYDLGQHGL AQRYLIQGLR
LAQAGSDRVM GGRLLSNMSH QANYLGQYQE AAQLARAAQE GTRGAASATV SAMFLAMEAR
ARAGAGDARG CTSVLREAES AFNRRGEGGD PPWIYYFDEA EMAGEAAHCF RDLRSPKLAL
EFVTRAIELT DPVYVRTHAF IRLVNAASCL HASKPDAEKA AEVSLEAIRL AGSLKSERYL
RYVRDLRADF TPVATSVAAK RALNAFDALL DSN
|
|---|
| |