Gene Sare_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1136 
Symbol 
ID5704280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1286850 
End bp1287836 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content73% 
IMG OID641270651 
Producthypothetical protein 
Protein accessionYP_001536035 
Protein GI159036782 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0231211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000385837 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGCCGG ACCCCGGTCT TGTCGACCTG GCCGGGGACG GGCGGCTGCG CCGACTCGAG 
TTGGCTGTGA CGCGGCGGCT CGACGGTCTG CTGCATGGCC GCTACCAGGG GCTGCTTCCG
GGACCGGGCA GCGAACCGGC GGGCAGCCGG GAGTACCGGC CCGGCGAGGA CGAGGTGCGC
CGGATGGACT GGGCGGTGAC GGCGCGCACG ACCGTGCCGC ACGTCCGTCA ACTGGACGCC
GACCGGGAAC TCACCACCTG GCTGCTGGTC GACGCCAGCA TCAGCATGGA GTACGGCACG
GCCGAGTTGG ACAAGCGGGA GCTCGCGGTA GCTGCCGTGG CGGCGGTCGG CTTCCTCACC
GTCGGTGTGG GCAACCGACT CGGTGCCCAG GTGCTCACCC CGACCGCGCT GCGCCGGTAT
CCCCCCGGCA GCGGCCGAAC CCACCTGTTC GGGCTGCTCC GGATGCTGTT GGCGGCCCCT
CGGCACGGCG GCTACGACGG GGACACCGCG CCGCTCGCGT CGCCCGACCT GGCCACGGCG
CTGGACGGCG TGCACCGGAC AGCCACCCGT CGCGGGCTCG TCGTGGTGAT CTCGGACTTC
TTGGACGGCC TGCCGGACGC ACCCGGACGG GCTGCGCCCT GGGAACGGAT CCTGCGGCGG
CTCGCGGTCC GTCACCAGGT GCTCGCGGTG GAGGTGACCG ACCCGCGTGA GTGGGAACTA
CCGGACGTCG GCCTGGTCAC CCTGTTGGAC CCGGAGAACG GCCGACGGCG TGAGGTCTGG
ACTGGCGATC CCCGGCTGCG CCGGCGGTAC GCCGCGGCGG CTGCTGCTCA GCGTGACCAG
GTACGCCAGT CGTTGCGTCG CAGCGGGGCG GCGCACCTGC CGCTGCGAAC CGACCGCGAC
TGGGTGGCCG ACATCGTGCG GTACGTGCAC CAACAACGTC GGCTGGCAAC CGCGCCGGTC
CCCGCCGGTG GGAGTGGTGG CGCGTGA
 
Protein sequence
MPPDPGLVDL AGDGRLRRLE LAVTRRLDGL LHGRYQGLLP GPGSEPAGSR EYRPGEDEVR 
RMDWAVTART TVPHVRQLDA DRELTTWLLV DASISMEYGT AELDKRELAV AAVAAVGFLT
VGVGNRLGAQ VLTPTALRRY PPGSGRTHLF GLLRMLLAAP RHGGYDGDTA PLASPDLATA
LDGVHRTATR RGLVVVISDF LDGLPDAPGR AAPWERILRR LAVRHQVLAV EVTDPREWEL
PDVGLVTLLD PENGRRREVW TGDPRLRRRY AAAAAAQRDQ VRQSLRRSGA AHLPLRTDRD
WVADIVRYVH QQRRLATAPV PAGGSGGA