| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1061 |
|---|
| Symbol | |
|---|
| ID | 5705674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1189052 |
|---|
| End bp | 1190524 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641270577 |
|---|
| Product | UbiD family decarboxylase |
|---|
| Protein accession | YP_001535961 |
|---|
| Protein GI | 159036708 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0281996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACT TCACCGACCT ACGTGGCTAT CTCGACGCAC TCGACGCGCT CGGTGACCTG
AGGACCATCG AGCGGTCCGT GAGTGTCGAC CTGGAAGCAG CGGCGATTAC CCGCCGCTCG
TACGAGATCC GCGCCGCCGC ACCGCTGTTC ACCAACATCG CCGAGGACCG GACAGGCATG
CGGATGTTCG GGGCTCCCGC CGGTGTCAGC TCCCGAGCCG ACATGCCGCT CGCCCGGCTC
GCGCTCTCCG TCGGCCTGCC ACCCGAGACC GGTGCGGCGG CACTCGTGGA CCACCTCGTC
CGCGTCCGCG ACGCGGTGCC CGTACCGCCG CGGGCGGTGC CGCGCGAGAA CGCGCCGTGC
AAGCAGAACG TGTTGCTCGG TAGGGAGGCG ACACTGGACC GGTTCGCGGT CCCACGTCTG
CACGAGTCCG ACGGCGGCCG GTACCTCAAC ACCTGGGGTG TGATCGTTGT CAGGACGCCC
GACGGTGCGT GGGTCAACTG GTCGATCTCG CGGATCATGA TGCTCGACGG CAAACGGATG
ACAGGCCTGG TGGTGCCACC GCAGCACCTC GGTCTGGTCT GGCAGGCGTG GGCCGAGCGC
GGTGAGCCGA TGCCCTACGC GCTGGTGCAG GGCGGCGCCC CGGCGATTCC CTTCGTGGGC
GGTATCCCGC TGCCGCGCGG GGTGGACGAG GCCGGGTACA TCGGCGCGCT GCATGGGGAG
CCGGTCGAGG TGGTGCGCTG CGAAACCTCC GACCTGGAGG TACCCGCGCA CGCCGAGGTG
GTCATCGAGG GACACATGTC GGTGGGCCGG GACAGCCGTG AGGGGCCGTT CGGCGAGTAC
GCCGGCTACG CCTCCACCCA GTCCTCCACC CAGCCGGTGT ACTCGGTGGA GGCCATCACC
TACCGCGACG ACCCGATCTG GCCGATCGTC CCGGAGGGCC GGCCGCCCGA CGAGTACCAC
ACCGTGACCG GCACCGGTCG CGCCGCGAAC GTCCTGCACG CGCTGCGACG GGCAGGGCTG
CCGGTGACCA CGGTGTGGAT GCCGTTCCCG GCAGCGATGC ACTGGACCGT GGTGACCGTC
CCGGACGACT GGCGGTCGCA CCTACCCGGG GTGGACTCCG GAGAGTTCGT ACGACGAATC
GGCGAGGTCA TCCACAACAG CGGTGGACCC AGCGCGATGA TGCCGGTCAC CTTCGTTCTG
GATGATGACA TCGACCCCTC CAACGAGGCC GACCTGCTGT GGGCGCTGTC CACCCGGTTG
CATCCGAAGG ACCGACGCTT CGCCTGGGAC GGTGTGGTCC TACCGTTCAT GGCCTGCTAC
ACCGAAGACG AGCGCAAGAC GATGCGTGGT CCGAGTGTCG TCCATGACGG GCTGCTGCCT
GCCTGGGGCG AGGGCCGGCT GCACCACAGT TCCTTCGCCC AGGCCTACCC CGCCGACATC
CGCCGCAGGG TGCTCGAGCA CGAAGACGGT TGA
|
|---|
| Protein sequence | MSHFTDLRGY LDALDALGDL RTIERSVSVD LEAAAITRRS YEIRAAAPLF TNIAEDRTGM
RMFGAPAGVS SRADMPLARL ALSVGLPPET GAAALVDHLV RVRDAVPVPP RAVPRENAPC
KQNVLLGREA TLDRFAVPRL HESDGGRYLN TWGVIVVRTP DGAWVNWSIS RIMMLDGKRM
TGLVVPPQHL GLVWQAWAER GEPMPYALVQ GGAPAIPFVG GIPLPRGVDE AGYIGALHGE
PVEVVRCETS DLEVPAHAEV VIEGHMSVGR DSREGPFGEY AGYASTQSST QPVYSVEAIT
YRDDPIWPIV PEGRPPDEYH TVTGTGRAAN VLHALRRAGL PVTTVWMPFP AAMHWTVVTV
PDDWRSHLPG VDSGEFVRRI GEVIHNSGGP SAMMPVTFVL DDDIDPSNEA DLLWALSTRL
HPKDRRFAWD GVVLPFMACY TEDERKTMRG PSVVHDGLLP AWGEGRLHHS SFAQAYPADI
RRRVLEHEDG
|
|---|
| |