Gene Sare_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1029 
Symbol 
ID5708260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp1152577 
End bp1153143 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID641270546 
Producthypothetical protein 
Protein accessionYP_001535930 
Protein GI159036677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0294615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00421364 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTCGGTG AAGCCATGGG CAGTCCGGAC ACGATCCTCG TCTGCATTCG GGGTAGCTCC 
GGCTCGGGTA AGAGCAGCAT CGCCCGGGAG CTGCGACGCC GGCACGGCCG GGGCTGCGCC 
CTGGTCGAGC AGGACTACCT GCGCCGCATC CTGCTACGCG AGCGGGACAA GCCCGGCGGA 
GCGGCACCCG CCCTGATCGC GCAGACCGTC CGGTTCGCCC TCGACCACGG CTATCCCGTC 
GTACTGGAGG GCATCCTGCA CCGCAGCCGC TACCGCAGCA TGCTGACTGC CCTGCGGGAC 
GACCACCGGG GGCGGTCGCT GTTCTGCTAC CTCGACGTGT CCCCGGAAAC CCTGAGCCGG 
CATCTCACCC GCCCGCAAGC TACGGAGTTT ACCGCCGAGC ACATGAGCGG TTGGTATGTC 
GCTCACGACG TCCTGGGCTG GCCTGACGAA TTCGAATTCG TCCTCCCCGA GACCACCGAA 
CTGAACGAGG CCGTCGCGGC TGCTGCCGGG CTCCCCCCCC AGACCGGGCG CGACGACGAC 
CTGCTGCCGA ACATTCCGTT TACGTAG
 
Protein sequence
MLGEAMGSPD TILVCIRGSS GSGKSSIARE LRRRHGRGCA LVEQDYLRRI LLRERDKPGG 
AAPALIAQTV RFALDHGYPV VLEGILHRSR YRSMLTALRD DHRGRSLFCY LDVSPETLSR 
HLTRPQATEF TAEHMSGWYV AHDVLGWPDE FEFVLPETTE LNEAVAAAAG LPPQTGRDDD 
LLPNIPFT