Gene Sare_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0900 
Symbol 
ID5706046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1011126 
End bp1012322 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content75% 
IMG OID641270418 
Producthypothetical protein 
Protein accessionYP_001535808 
Protein GI159036555 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0343044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACG GTACGGCCGG CGTTCGCGGC CACCGGGAAG CCGACGAGGC CCTGCTGGAC 
AATCTGGATG CGCTCGCCGA GCGGGACCCG GGTGGGATGC TGCGGCACAC TGCCTCCGGT
GGGGCGCAGG TCCGCGAGTC AGCAGCCCTC GCCGCCGAGG CCAACCTGTC GGTGCTCGCC
GACGAGGGGC GTCCGCGGGC GGTCGTGATC GCCGGGATCG GCACGGCCGG GCGGACCGGT
GACGTGCTGG CGACGGTCGC CGGGCCGCGC TGCCCGGTTC CGGTGATCCC GCATCGCAGC
GCCGGCGTGC CCGGCTGGGT GGGCGCCGCC GACGTGGTCG TCGCGGTCAG CGCCTCCGGC
CGCAGCCCGG AAGCGCTCGG TGCGGCCGAG GCGGCCCATC GGCGGGGTGC CCGCCTCGTC
GCGGTCGGCG CCCCGGACTC CCAGTTGCAA TCGGTCGCGG AGCGGGCCCG GGCACCCTTC
GTCCCCGTGC CGCGGCGTGC CCCGGCGCGG GCGAGTCTCT GGGCGCTCAC CGTGCCGGTG
CTGCTGGCCG CCCGGATGCT CGGCCTGGTC AAGGTCAATG AGGCGGATCT GGCCGAGACC
GCCGCCCGAT TGGACGCCGA CGCCGACCGG TGCCGGCCCT CCGCCGAGTC CTTCGTCAAT
CCGGCCAAGT CGCTCGCGCT GGGCCTGGCC GGCTCGATCC CGATCGTCTG GGGGTCGTCG
CCGTTGGCCA CCGTCGCGGC CCGCCGGTTC GGCGACACCC TGTCGGCGAA CGCCCGGTAT
CCGGTCGTCT CCGGGGCGCT CGGCGAGGCG GGCCGCGGTC GGGTCGGCCT GCTCGACGGG
GTCTTCGGCG GGTTGGTCGA GGGGGAGCGG GACATTTTCG CCGACCCCGA CCGGGCGACA
ACGGCCGAGA CACGCCTGCG GTTGGTGCTG CTGCGCGACG GCGGCCTCAA CCCGGAGGAC
GACGCCGATG AGCCGCTCGT GGTCGAGGAG CGGCGTGCTG ACGCCGTCCA GACGCTCGCC
GAGCGTCGGG GGGTGCGCTG CGATGTGGTC ACCGCCGAAG GGGGCTCGGC GCTGGAGCGG
CTTGCCTCGC TGATCACGGT TCCGGACTTC GCCTCGATCT ACCTCGCGCT GGCGCACGGA
CTCGACCCGA TGGCCGTGCC GGCCATCACC GAGATGAAGG AGTTGGCCAA CCAGTGA
 
Protein sequence
MIDGTAGVRG HREADEALLD NLDALAERDP GGMLRHTASG GAQVRESAAL AAEANLSVLA 
DEGRPRAVVI AGIGTAGRTG DVLATVAGPR CPVPVIPHRS AGVPGWVGAA DVVVAVSASG
RSPEALGAAE AAHRRGARLV AVGAPDSQLQ SVAERARAPF VPVPRRAPAR ASLWALTVPV
LLAARMLGLV KVNEADLAET AARLDADADR CRPSAESFVN PAKSLALGLA GSIPIVWGSS
PLATVAARRF GDTLSANARY PVVSGALGEA GRGRVGLLDG VFGGLVEGER DIFADPDRAT
TAETRLRLVL LRDGGLNPED DADEPLVVEE RRADAVQTLA ERRGVRCDVV TAEGGSALER
LASLITVPDF ASIYLALAHG LDPMAVPAIT EMKELANQ